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lh3 / psmc

Implementation of the Pairwise Sequentially Markovian Coalescent (PSMC) model
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Error while running psmc_plot.pl #22

Open agesantos opened 3 years ago

agesantos commented 3 years ago

Hello,

I am trying to run psmc_plot.pl but it always finished with the fowling error: "Can't exec "epstopdf": Not a directory at /psmc/utils/psmc_plot.pl line 236, <> line 2309." I am having trouble figuring out what the problem is, can anyone help me?

Thank you, André

lh3 commented 3 years ago

you need to install the latex stack to convert eps to pdf. If you see a eps file, you can also convert with other tools.

agesantos commented 3 years ago

Thank you,

Yes, I do see an eps file. That means that (besides not converting into pdf) the script run successfully? I will try to install latex stack anyway.

Once again thank you, André

eduardo-pizarro commented 1 year ago

Hi In case you run into this problem and you don't have sudo privileges, you can create a conda environment and install texlive-core on it.

Luo-Shigan commented 1 week ago

Hi In case you run into this problem and you don't have sudo privileges, you can create a conda environment and install texlive-core on it. it is useful