Hi, dear friends.
I have ran multiple sample in PSMC, most results are normal lines with curves, but in some samples, results are a straight line.(the dark blue one) I checked the input file, and each of them has about 0.3% heterozygosity locus. Samples have normal results have about 0.1% heterozygosity locus.
Why did this happened? And I want to know how to avoid this issue. Thank you!
se420
Hi, dear friends. I have ran multiple sample in PSMC, most results are normal lines with curves, but in some samples, results are a straight line.(the dark blue one) I checked the input file, and each of them has about 0.3% heterozygosity locus. Samples have normal results have about 0.1% heterozygosity locus. Why did this happened? And I want to know how to avoid this issue. Thank you! se420![屏幕截图 2024-01-04 101454](https://github.com/lh3/psmc/assets/127398278/e6f5c2ce-c4de-4ca3-91e3-bfaa7d8bc167)