Closed DarioS closed 5 years ago
Using <(zcat fastq.gz) as input produces empty output. All of the examples use plain FASTQ files, which made me think it doesn't work with compressed ones. But, it does. The documentation could be much improved.
<(zcat fastq.gz)
The second sentence in Introduction:
It seamlessly parses both FASTA and FASTQ files which can also be optionally compressed by gzip.
2-pass sampling of course won't work with stream.
Using
<(zcat fastq.gz)
as input produces empty output. All of the examples use plain FASTQ files, which made me think it doesn't work with compressed ones. But, it does. The documentation could be much improved.