lh3 / seqtk

Toolkit for processing sequences in FASTA/Q formats
MIT License
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converting fasta to fastq #209

Open keecarter opened 8 months ago

keecarter commented 8 months ago

I am attempting to convert my fasta files to fastq using the command: seq -F contig.2.fasta > contig.2.fq

but I keep getting: seq: invalid option -- F

shenwei356 commented 8 months ago

seq: invalid option -- F

This is the seq command from the system.

The right way is

seqtk seq -F G      contig.2.fasta > contig.2.fq
keecarter commented 8 months ago

So I am getting an fq file, but it is empty.