As mentioned in the manual, I have checked the read k-mer profile vs assembly k-mer profile using yak inspect. The output file contains lines starting with SNand QV.
Could you please help understand the output fields and how to calculate the completeness? Other outputs (qv, trioeval) from yak have header describing these fields.
As mentioned in the manual, I have checked the read k-mer profile vs assembly k-mer profile using
yak inspect
. The output file contains lines starting withSN
andQV
.Could you please help understand the output fields and how to calculate the completeness? Other outputs (qv, trioeval) from yak have header describing these fields.
Thank you