CUDA stub file missing for cpu-only build - Githubissues

lhatsk / AlphaLink

AlphaLink: Integrating crosslinking MS data into OpenFold

Apache License 2.0

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CUDA stub file missing for cpu-only build #14

Closed jgoodson closed 9 months ago

jgoodson commented 1 year ago

The changes in https://github.com/lhatsk/AlphaLink/commit/c07ef5414b68ea684954cae8df2b4f0c942dfc34 to allow for container builds are missing the addition of the openfold/utils/kernel/csrc/softmax_cuda_stub.cpp file used for building the kernel present in the upstream OpenFold repo: https://github.com/aqlaboratory/openfold/blob/main/openfold/utils/kernel/csrc/softmax_cuda_stub.cpp. If this file is provided in the appropriate directory the build succeeds.

lhatsk commented 1 year ago

Thank you for pointing this out! I added the file.