lhe17
commented
7 months ago Hi Jing Hua Zhao,
Thank you for reporting the issue.
This error is due to the recent release of RcppEigen 0.3.4. I'll try to update coxmeg to make it compatible with the latest version of RcppEigen as soon as possible. For now, you could circumvent this issue by uninstalling RcppEigen 0.3.4 and reinstalling a previous version (e.g., 0.3.3.9.4) listed on the archive website (https://cran.r-project.org/src/contrib/Archive/RcppEigen/).
Best regards, Liang
On Sat, Mar 2, 2024 at 9:31 AM Jing Hua Zhao @.***> wrote:
I attempt to compile 1.1.1 but stuck with file cswei.cpp,
cswei.cpp:31:29: error: cannot convert 'Eigen::internal::enable_if<true, Eigen::IndexedView<Eigen::Matrix<double, -1, 1>, double, Eigen::internal::SingleRange> >::type {aka Eigen::IndexedView<Eigen::Matrix<double, -1, 1>, double, Eigen::internal::SingleRange>}' to 'Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 1>::Scalar {aka double}' in assignment w_v_x(j) = temp(rs_rs(j)); ^ make: *** [cswei.o] Error 1 ERROR: compilation failed for package ‘coxmeg’
from this I change the function parameters from
Eigen::VectorXd cswei(const Eigen::MapEigen::VectorXd w_v, const Eigen::MapEigen::VectorXd rs_rs, const Eigen::MatrixXi & ind, const Eigen::VectorXd & rev) ...
to
Eigen::VectorXd cswei(const Eigen::MapEigen::VectorXd w_v, const Eigen::MatrixXi & rs_rs, const Eigen::MatrixXi & ind, const Eigen::VectorXd & rev) {
it then proceeds giving the next error,
logdeth.cpp:248:17: required from here /rds/project/jmmh2/rds-jmmh2-public_databases/software/R/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1042:8: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type {aka __vector(2) double}' [-Wignored-attributes] make: *** [logdeth.o] Error 1 ERROR: compilation failed for package ‘coxmeg’
- removing ‘/rds/project/jmmh2/rds-jmmh2-public_databases/software/R/coxmeg’
Would it be possible to provide a fix to this?
Thank you very much
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jinghuazhao
I attempt to compile 1.1.1 but stuck with file cswei.cpp,
cswei.cpp:31:29: error: cannot convert 'Eigen::internal::enable_if<true, Eigen::IndexedView<Eigen::Matrix<double, -1, 1>, double, Eigen::internal::SingleRange> >::type {aka Eigen::IndexedView<Eigen::Matrix<double, -1, 1>, double, Eigen::internal::SingleRange>}' to 'Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 1>::Scalar {aka double}' in assignment w_v_x(j) = temp(rs_rs(j)); ^ make: *** [cswei.o] Error 1 ERROR: compilation failed for package ‘coxmeg’
from this I change the function parameters from
Eigen::VectorXd cswei(const Eigen::Map w_v, const Eigen::Map rs_rs,
const Eigen::MatrixXi & ind, const Eigen::VectorXd & rev)
...
to
Eigen::VectorXd cswei(const Eigen::Map w_v, const Eigen::MatrixXi & rs_rs,
const Eigen::MatrixXi & ind, const Eigen::VectorXd & rev) {
it then proceeds giving the next error,
logdeth.cpp:248:17: required from here /rds/project/jmmh2/rds-jmmh2-public_databases/software/R/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1042:8: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type {aka __vector(2) double}' [-Wignored-attributes]
make: *** [logdeth.o] Error 1
ERROR: compilation failed for package ‘coxmeg’
Would it be possible to provide a fix to this?
Thank you very much