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lhilbert / VisitorGene_PseudoTime

Image analysis scripts to reconstruct gene-cluster visits from fluorescence microscopy data obtained from fixed samples
MIT License
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Why are some large OP masks not detected as OP objects? #3

Open lhilbert opened 3 months ago

lhilbert commented 3 months ago

Sometimes, the OP segmentation mask shows clearly very large objects that are not detected, that sit next to smaller segmented objects that are in fact detected. Why are these bigger objects not detected?

lhilbert commented 2 months ago

Has not been addressed. The very most likely explanation, however, is that the objects are detected in terms of being above threshold, but are simply too small to pass the criterion of sufficient volume.