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lhqing / cemba_data

Mapping pipeline for snmC-seq based technologies.
https://hq-1.gitbook.io/mc/
MIT License
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potential error in yap make-sample-sheet plateinfo_and_samplesheet.py #16

Open MichaelPeibo opened 9 months ago

MichaelPeibo commented 9 months ago

https://github.com/lhqing/cemba_data/blob/788e83cd66f3b556bdfacf3485bed9500d381f23/cemba_data/demultiplex/plateinfo_and_samplesheet.py#L94

I changed ll = re.split(r' |,|\t', 'line') to ll = re.split(r' |,|\t', line) and yap make-sample-sheet works

mbatiuk commented 5 months ago

can confirm same error

also solution works well