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lhqing / whole_mouse_brain

misc code for whole mouse brain analysis
MIT License
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Finalize the dataset to mC L4 map #3

Closed lhqing closed 2 years ago

lhqing commented 2 years ago 
# prepare code in
# ~/project/cemba/study/Integration/summarize_integratio

# TO use the mC L4 multiome zarr
from wmb import biccn_integration
from ALLCools.mcds import MCDS
mcds = MCDS.open(biccn_integration.MC_L4_MULTIOME_ZARR, obs_dim='L4')