I like phytools::dotTree(), it's simple and handy!
I have a case where I'm plotting discrete values and there are some missing values. I'd like these to be handled differently, but now they're filled in with white which looks like it's part of the scale.
Here's an example:
What I've done here after pruning the tree (poly_tree) and data frame (poly_tree_tip_value_df) with data is this:
dear Dr @liamrevell
I like phytools::dotTree(), it's simple and handy!
I have a case where I'm plotting discrete values and there are some missing values. I'd like these to be handled differently, but now they're filled in with white which looks like it's part of the scale.
Here's an example:
What I've done here after pruning the tree (poly_tree) and data frame (poly_tree_tip_value_df) with data is this:
I saw your blog post about setting pts to F, but this made no difference I'm afraid.
I see these solutions:
What do you think?
Happy for any advice :)