Closed baptelie closed 4 years ago
$Nnode does seem to change (but give me a reproducible example if you think this is not the case).
Unfortunately, $node.label is not yet supported for the "simmap" object class. It would be good to add that in the future.
Hi, I think there is a little bug with the function extract.clade.simmap, the returned tree has the same tree$Nnode and tree$node.label attributes as the input tree.