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lianos / sparrow

Take command of your set enrichment analyses.
https://lianos.github.io/sparrow/
MIT License
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Reorders parameters in seas() function to put the feature container first. #8

Closed lianos closed 3 years ago

lianos commented 3 years ago

The seas() function is polymorphic over the object that contains the feature data/ranks/etc. (The ExpressionSet, data.frame of feature ranks, etc.)

This PR moves the x parameter which stores this object first inline, puts the GeneSetDb second, and the methods argument third. Everything else after that just informs how the GSEA mojo will work over the combination of those first three parameters.