SSAM workflow image - Githubissues

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SSAM workflow image #1

Open lidanwu opened 3 years ago

lidanwu commented 3 years ago

Figure 1 of SSAM paper

J Park, W Choi, S Tiesmeyer, B Long, LE Borm, E Garren, TN Nguyen, S Codeluppi, M Schlesner, B Tasic, R Eils, N Ishaque. "Segmentation-free inference of cell types from in situ transcriptomics data." bioRxiv 800748. doi: https://doi.org/10.1101/800748

lidanwu commented 3 years ago

diagnostic plots MicrosoftTeams-image

lidanwu commented 3 years ago

Figure 1a of JSTA paper

Russell Littman, Zachary Hemminger, Robert Foreman, Douglas Arneson, Guanglin Zhang, Fernando Gómez-Pinilla, Xia Yang, Roy Wollman. "JSTA: joint cell segmentation and cell type annotation for spatial transcriptomics." bioRxiv 2020.09.18.304147; doi: https://doi.org/10.1101/2020.09.18.304147