lidaof / eg-react

WashU Epigenome Browser
https://epigenomegateway.wustl.edu
Other
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Macaca fascicularis is the most important experimental monkey, and we are very much looking forward to your team addressing this issue #347

Closed Qusteq closed 5 months ago

Qusteq commented 6 months ago

Thank you for WashU's very powerful capabilities. The crab-eating macaque (Macaca fascicularis) is currently the most commonly used monkey in medical research, and we have seen recent reports on Hi-C for Macaca fascicularis(NCBI RefSeq assembly: GCF_012559485.2). Unfortunately, we were unable to find a reference genome for Macaca fascicularis in WashU Epigenome Browser. We did notice that WashU offers a method for uploading new genomes, but more people would benefit if the WashU team could upload it. We have tried many times, but due to limited capabilities, we have all failed. We earnestly request that the WashU team upload the reference genome for the crab-eating macaque.

The 2bit, chrom.sizes, and cytoBand.bb are following:

https://hgdownload.soe.ucsc.edu/hubs/GCF/012/559/485/GCF_012559485.2/GCF_012559485.2.2bit

https://hgdownload.soe.ucsc.edu/hubs/GCF/012/559/485/GCF_012559485.2/GCF_012559485.2.chrom.sizes.txt

https://hgdownload.soe.ucsc.edu/hubs/GCF/012/559/485/GCF_012559485.2/bbi/GCF_012559485.2_MFA1912RKSv2.cytoBand.bb

Macaca fascicularis is the most important experimental monkey, and we are very much looking forward to your team addressing this issue.

Thank you very much!

lidaof commented 6 months ago

Hi @Qusteq of course, we will work on adding this genome, will keep you posted.

Qusteq commented 6 months ago

Hi @Qusteq of course, we will work on adding this genome, will keep you posted.

Thank you Dr. Li for your reply. We are looking forward to it and are eager to receive it!

lidaof commented 5 months ago

Hi @Qusteq sorry for the delay, the genome GCF_012559485.2 was added to our browser.

Qusteq commented 5 months ago

Hi @Qusteq sorry for the delay, the genome GCF_012559485.2 was added to our browser.

Thank you very much for you and your team. Great work! Hundreds of millions of thanks!!!