lifebit-ai / gwas

GWAS pipeline using SAIGE
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Adds querying feature for CB output #81

Closed mcamarad closed 4 years ago

mcamarad commented 4 years ago

Summary:

Implements querying functionality to solve issues when a categorical variable has values that are not being selected and could potentially contaminate the filtering.

Tasks:

Comments:

When multiple queried values for the same phenotype found for an individual it select the first of the values in the list.

Test in CloudOS

without query image with query image