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limresgrp / FMAP_v1

Codes to use funnel-metadynamics and funnel metadynamics automated protocol
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Input Example Not Running #3

Closed CoryKornowicz closed 2 years ago

CoryKornowicz commented 2 years ago

When trying to run the input example through 

plumed driver --plumed plumed.dat --mf_pdb start.pdb

it returns an error about the listed indexes not being found, and upon looking at the start.pdb file, they are in fact not there. Could you upload a full input example for testing?

h2nch2co2h commented 2 years ago

Hi,

I added the file containing all atoms.

This should allow you to run the driver.