lina-usc / pylossless

🧠 EEG Processing pipeline that annotates continuous data
https://pylossless.readthedocs.io/en/latest/
MIT License
15 stars 8 forks source link

HPC Installation Instructions #127

Closed Andesha closed 1 year ago

Andesha commented 1 year ago

The following is my workflow for getting everything running smoothly in an environment on Narval.

Hopefully addresses #126 and #98 for the time being.

codecov[bot] commented 1 year ago

Codecov Report

Merging #127 (ca41c72) into main (4db5348) will not change coverage. The diff coverage is n/a.

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scott-huberty commented 1 year ago

Thanks @Andesha - I will definitely give this a swing on Narval this week!

Re: documentation, I wonder if we should put this as a dedicated page in our documentation, specifically for CC users, since these directions are specific to compute canada (i.e. other HPC's won't necessarily have a wheel built for mne?).

I could do that but it will probably be a while before it gets done.

scott-huberty commented 1 year ago

Just tried out your instructions. Runs on narval like a charm! Even got a 50% speed improvement compared to my local computer.

Awesome that we have a wheel for MNE on compute canada now.

Andesha commented 1 year ago

Feel free to make the change or move it into a wiki page or something - any of those sorts of things are fine with me

christian-oreilly commented 1 year ago

Re: documentation, I wonder if we should put this as a dedicated page in our documentation, specifically for CC users, since these directions are specific to compute canada (i.e. other HPC's won't necessarily have a wheel built for men?).

Indeed, a specific tutorial page seems a good idea. +1