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linbox-team / linbox

LinBox - C++ library for exact, high-performance linear algebra
https://linbox-team.github.io/linbox
GNU Lesser General Public License v2.1
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Fatal warning during installation: givaro/givconfig.h - no such file or directory #244

Closed HereAround closed 1 year ago

HereAround commented 4 years ago

I am trying to install linbox on Ubuntu18.04. Unfortunately, I receipt several warning about givaro/givconfig.h not being present. How can I resolve this?

Explicitly, I use this git-repository (I am at commit 553ba4893d058ead1bc5bd1d161349433200d5bd from 19/12/2019) and have followed the instructions at https://linalg.org/linbox-html/install-dist.html for the installation. I have thus issued the linbox-auto-install.sh with the following options:

./linbox-auto-install.sh --prefix=/my-lib-folder --enable-openblas=y --enable-blis=y --enable-gmp=y --enable-check=y --enable-optimization=y --enable-drivers=y

where 'my-lib-folder' my chosen folder for the libraries. This script finishes by reminding me to issue " export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:my-lib-folder'". However, it also issues a critical warning just before that:

../../linbox/integer.h:44:10: fatal error: givaro/givconfig.h: No such file or directory

include <givaro/givconfig.h>

In my case, this file is located in three locations:

I have issued "export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:my-lib-folder" hoping that then, the file my-lib-folder/include/givaro/givconfig.h would be found. However, if I now issue "make", then the same warning appears again and make finishes by

Makefile:601: recipe for target 'check-recursive' failed make: *** [check-recursive] Error 1

I have also issued "make check". Here is its summary:

Below this printout, however, again the above warning is being raised and it finishes by

Makefile:601: recipe for target 'check-recursive' failed make: *** [check-recursive] Error 1

For completeness, here is the output of make fullcheck:

./checker test-bitonic-sort build OK, run OK.
test-blackbox-block-container build OK, run OK.
test-blas-domain build OK, run OK.
test-blas-matrix build OK, run OK.
test-block-wiedemann build OK, run OK.
test-butterfly build OK, run OK.
test-charpoly build OK, run OK.
test-commentator build OK, run OK.
test-companion build OK, run OK.
test-cra build OK, run OK.
test-cradomain build OK, run FAIL test-dense build OK, run OK.
test-dense-zero-one skipped, half baked, bds responsible test-det build OK, run OK.
test-diagonal build OK, run OK.
test-dif build OK, run OK.
test-direct-sum build OK, run OK.
test-dyadic-to-rational build OK, run OK.
test-echelon-form build OK, run OK.
test-ffpack build OK, run OK.
test-fft build OK, run OK.
test-fibb build OK, run OK. incomplete test-frobenius build OK, run OK.
test-frobenius-large skipped, NTL not present test-frobenius-small skipped, NTL not present test-getentry build OK, run OK.
test-gf2 build OK, run OK.
test-givaro-interfaces build OK, run OK.
test-givaropoly build OK, run OK.
test-givaro-zpz build OK, run OK.
test-givaro-zpzuns build OK, run OK.
test-gmp-rational build OK, run OK.
test-hadamard-bound build OK, run OK.
test-hilbert build OK, run OK.
test-hom build OK, run OK.
test-invariant-factors skipped, NTL not present test-inverse build OK, run OK.
test-isposdef build OK, run OK.
test-ispossemidef build OK, run OK.
test-last-invariant-factor build OK, run OK.
test-local-smith-form-sparseelim build OK, run OK.
test-matpoly-mult build OK, run OK.
test-matrix-domain build OK, run OK.
test-matrix-stream build OK, run OK.
test-minpoly build OK, run FAIL test-modular-balanced-double build OK, run OK.
test-modular-balanced-float build OK, run OK.
test-modular-balanced-int build OK, run OK.
test-modular-double build OK, run OK.
test-modular-float build OK, run OK.
test-modular-int build OK, run OK.
test-moore-penrose build OK, run OK.
test-mpi-comm skipped, MPI not present test-ntl-hankel skipped, NTL not present test-ntl-lzz_p skipped, NTL not present test-ntl-lzz_pe skipped, NTL not present test-ntl-lzz_pex skipped, NTL not present test-ntl-lzz_px skipped, NTL not present test-ntl-rr skipped, NTL not present test-ntl-sylvester skipped, NTL not present test-ntl-toeplitz skipped, NTL not present test-ntl-zz_p skipped, NTL not present test-nullspace build OK, run OK.
test-one-invariant-factor build OK, run FAILprobalistic algorithm, sometimes fails test-opencl-domain skipped, OpenCL not present test-optimization skipped, not unit/regression test conforming test-order-basis build OK, run OK.
test-param-fuzzy build OK, run OK. Noncompliant field test-permutation build OK, run OK.
test-plain-domain build OK, run OK.
test-poly-det skipped, incomplete test (if still relevant) test-polynomial-ring build OK, run OK.
test-qlup build OK, run OK.
test-quad-matrix skipped, half baked, bds responsible test-randiter-nonzero-prime build OK, run OK.
test-random-matrix build OK, run OK.
[PASS]: data/rk9_7_10.sms rank 10 [PASS]: data/rk9_7_10.sms rank 9 mod 7 test-rank-ex build OK, run OK.
test-rank-Int build OK, run OK.
test-rank-md build OK, run OK.
test-rank-u32 build OK, run OK.
test-rat-charpoly skipped, stale test. solns over QQ need fresh tests test-rational-matrix-factory build OK, run OK.
test-rational-reconstruction-base build OK, run OK.
test-rational-solver-adaptive build OK, run OK.
test-rational-solver build OK, run OK.
test-rat-minpoly skipped, stale test. solns over QQ need fresh tests test-rat-solve skipped, infinite loop test-regression2 build OK, run OK.
test-regression build OK, run OK.
test-scalar-matrix build OK, run OK.
test-serialization build OK, run OK.
test-smith-form-adaptive build OK, run OK.
test-smith-form-binary build OK, run FAIL test-smith-form build OK, run OK.
test-smith-form-iliopoulos build OK, run OK.
test-smith-form-local build OK, run OK.
Expected smith form SL: {{1,8}{1440000,1}{0,2}} Computed Smith form SL: {{1,8}{1440000,1}{0,2}} PASSED. Expected smith form: [1, 1, 1, 1, 1, 1, 1, 1, 1440000, 0, 0] Computed Smith form: [1, 1, 1, 1, 1, 1, 1, 1, 1440000, 0, 0] PASSED. Expected smith form SL: {{1,23}{10,1}{1560,1}} Computed Smith form SL: {{1,23}{10,1}{1560,1}} PASSED. Expected smith form: [1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 10, 1560] Computed Smith form: [1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 10, 1560] PASSED. Expected smith form SL: {{1,22}{2,1}{66,2}{198,1}{15444,1}{0,3}} Computed Smith form SL: {{1,22}{2,1}{66,2}{198,1}{15444,1}{0,3}} PASSED. Expected smith form: [1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 66, 66, 198, 15444, 0, 0, 0] Computed Smith form: [1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 66, 66, 198, 15444, 0, 0, 0] PASSED. test-smith-form-valence build OK, run OK.
test-solve build OK, run OK. most of the tests are commented out test-solve-full build OK, run OK.
test-solve-nonsingular build OK, run OK.
test-sparse build OK, run OK.
test-sparse-map-map skipped, const issue in givranditer, curious use of nonexistant next() in Extension test-subiterator build OK, run OK.
test-submatrix build OK, run OK.
test-subvector build OK, run OK.
test-sum build OK, run OK.
test-toeplitz skipped, NTL not present test-toeplitz-det skipped, NTL not present test-toom-cook build OK, run OK. one method does not work test-trace build OK, run OK.
test-transpose build OK, run OK.
test-triplesbb build OK, run OK.
test-triplesbb-omp build OK, run OK.
test-tutorial build OK, run OK.
test-vector-domain build OK, run OK.
test-weak-popov-form skipped, NTL not present test-zero-one build OK, run OK.

Of 117 tests, 88 passed, 0 failed to compile, 4 failed at runtime, and 25 were skipped.

Makefile:3221: recipe for target 'fullcheck' failed make[1]: [fullcheck] Error 255 make[1]: Leaving directory '/home/i/HDD/Computer/Mathematics_software/linbox/tests' Makefile:1030: recipe for target 'fullcheck' failed make: [fullcheck] Error 2

HereAround commented 4 years ago

Allow me to add more details. Since https://ci.inria.fr/linbox/job/LinBox/ tells me that the latest build fails, I have also tried the latest stable version according to jenkins:

This also leads to the above issue.

jgdumas commented 4 years ago

Hello, sorry cannot reproduce that one. Can you post (or send me the 'linbox-auto-install.log' ?

HereAround commented 4 years ago

By now, I have installed linbox from the sources, i.e. without using the linbox-auto-install.sh.

Still, for your convenience, I have just reproduced the above error once more. I send you the log by email.

jgdumas commented 4 years ago

OK. This is some errors in the drivers for Maple in the interfaces/driver directory. If you are not using Maple everything should be fine (just remove the '--enable-drivers=y' option). I flag this as a prolem in these drivers.