lindawangg / COVID-Net

COVID-Net Open Source Initiative
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KeyError: 'COVID(1).png' #216

Open SamanehShamshiri opened 2 years ago

SamanehShamshiri commented 2 years ago

when I run the COVIDnet-CXR4-A on these parameters:

python train_tf.py --weightspath models/COVIDNet-CXR4-A --metaname model.meta --ckptname model-18540 --n_classes 3 --trainfile labels/train_COVIDx8A.txt --testfile labels/test_COVIDx8A.txt --out_tensorname norm_dense_1/Softmax:0 --logit_tensorname norm_dense_1/MatMul:0 --epochs 1

I have the following error: File "train_tf.py", line 99, in is_severity_model=args.is_severity_model) File "D:\worksppace\COVID-Net-master\COVID-Net-master\data.py", line 146, in init datasets[l.split()[2]].append(l) KeyError: 'COVID(1).png'

would you please tell me how can I solve this problem? thank you very much in advance

I am running the code on windows 10; here are the versions I installed: python:3.6.4 tensorflow:1.15.5 tensorflow-gpu:1.15.5 opencv:4.2 cuda10.0 cudnn:7.4.2

absl-py==0.10.0 aiohttp==3.6.2 anyio==2.1.0 argon2-cffi==20.1.0 astor==0.8.1 async-generator==1.10 async-timeout==3.0.1 attrs==20.2.0 Babel==2.9.0 backcall==0.2.0 bleach==3.2.1 cached-property==1.5.2 cachetools==4.1.1 certifi==2020.6.20 cffi==1.14.3 chardet==3.0.4 contextvars==2.4 cycler==0.10.0 dataclasses==0.8 decorator==4.4.2 defusedxml==0.6.0 entrypoints==0.3 gast==0.2.2 google-auth==1.22.0 google-auth-oauthlib==0.4.1 google-pasta==0.2.0 grpcio==1.32.0 h5py==2.10.0 idna==2.10 idna-ssl==1.1.0 importlib-metadata==1.7.0 ipykernel==5.3.4 ipython==7.16.1 ipython-genutils==0.2.0 ipywidgets==7.5.1 jedi==0.17.2 Jinja2==2.11.2 joblib==0.16.0 json5==0.9.5 jsonschema==3.2.0 jupyter==1.0.0 jupyter-client==6.1.7 jupyter-console==6.2.0 jupyter-core==4.6.3 jupyter-server==1.3.0 jupyterlab==3.0.7 jupyterlab-pygments==0.1.1 jupyterlab-server==2.2.0 kaggle==1.5.8 Keras==2.2.4 Keras-Applications==1.0.8 Keras-Preprocessing==1.1.2 kiwisolver==1.2.0 Markdown==3.2.2 MarkupSafe==1.1.1 matplotlib==3.3.2 mistune==0.8.4 multidict==4.7.6 nbclassic==0.2.6 nbclient==0.5.0 nbconvert==6.0.6 nbformat==5.0.7 nest-asyncio==1.4.0 nibabel==3.1.1 notebook==6.1.4 numpy==1.19.2 oauthlib==3.1.0 opencv-python==4.4.0.44 opt-einsum==3.3.0 packaging==20.9 pandas==1.1.2 pandocfilters==1.4.2 parso==0.7.1 pexpect==4.8.0 pickleshare==0.7.5 Pillow==7.2.0 prometheus-client==0.8.0 prompt-toolkit==3.0.7 protobuf==3.13.0 ptyprocess==0.6.0 pyasn1==0.4.8 pyasn1-modules==0.2.8 pycparser==2.20 pydicom==2.1.2 Pygments==2.7.1 pylibjpeg==1.1.1 pylibjpeg-libjpeg==1.1.0 pylibjpeg-openjpeg==1.0.1 pyparsing==2.4.7 pyrsistent==0.17.3 python-dateutil==2.8.1 python-slugify==4.0.1 pytz==2020.1 PyYAML==5.3.1 pyzmq==19.0.2 qtconsole==4.7.7 QtPy==1.9.0 requests==2.24.0 requests-oauthlib==1.3.0 rsa==4.6 scikit-learn==0.23.2 scipy==1.5.2 Send2Trash==1.5.0 six==1.15.0 slugify==0.0.1 sniffio==1.2.0 tensorboard==2.3.0 tensorboard-plugin-wit==1.7.0 tensorflow-estimator==1.15.1 tensorflow-gpu==1.15.5 termcolor==1.1.0 terminado==0.9.1 testpath==0.4.4 text-unidecode==1.3 threadpoolctl==2.1.0 tornado==6.1 tqdm==4.49.0 traitlets==4.3.3 typing-extensions==3.7.4.3 urllib3==1.24.3 wcwidth==0.2.5 webencodings==0.5.1 Werkzeug==1.0.1 widgetsnbextension==3.5.1 wrapt==1.12.1 xlrd==1.2.0 yarl==1.6.0 zipp==3.1.0

huyle73 commented 2 years ago

I have same problem with you. Can you tell me how to solve this problem? Thank you

SamanehShamshiri commented 2 years ago

I have same problem with you. Can you tell me how to solve this problem? Thank you

I couldn't solve the problem.

huyle73 commented 2 years ago

You can go to the newest master branch for downloading train_COVIDx9A.txt instead of the version 8