set seed for biostar145820.jar

lindenb / jvarkit

Java utilities for Bioinformatics

https://jvarkit.readthedocs.io/

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set seed for biostar145820.jar #189

Open sklasfeld opened 2 years ago

sklasfeld commented 2 years ago

set seed for biostar145820.jar

I am using biostar145820.jar to subsample bam files, and it works great. I was just wondering if there is a seed in the random shuffle for reproducibility purposes

My environment

version of jvarkit: 2021.08.10
version of java: openjdk 11.0.11 2021-04-20
the value of ${JAVA_HOME}
which OS: ubuntu

lindenb commented 2 years ago

@sklasfeld hi no problem, I've just added a --seed parameter. But for now it's only on the dev branch.