lindenb / jvarkit

Java utilities for Bioinformatics
https://jvarkit.readthedocs.io/
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Task :vcffilterjdk FAILED #215

Closed DavideGue closed 1 year ago

DavideGue commented 1 year ago

Verify

Subject of the issue

When running ./gradlew vcffilterjdk I get the following message: Task :vcffilterjdk FAILED FAILURE: Build failed with an exception. Where: Build file '/home/davide/Programs/jvarkit/build.gradle' line: 680 What went wrong: Execution failed for vcffilterjdk com.github.lindenb.jvarkit.tools.vcffilterjs.VcfFilterJdk. Error running javac compiler Try: Run with --stacktrace option to get the stack trace. Run with --info or --debug option to get more log output. Run with --scan to get full insights. Get more help at https://help.gradle.org BUILD FAILED in 5s 1 actionable task: 1 executed

Your environment

Steps to reproduce

I followed the procedure reported at the following link: http://lindenb.github.io/jvarkit/VcfFilterJdk.html

Expected behaviour

It should install vcffilterjdk

Actual behaviour

Build failed

DavideGue commented 1 year ago

I solved the issue by running the following command: sudo apt install default-jdk