linkedin / FastTreeSHAP

Fast SHAP value computation for interpreting tree-based models
BSD 2-Clause "Simplified" License
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ERROR IN INSTALLING FastTreeSHAP #25

Open ya-stack opened 1 year ago

ya-stack commented 1 year ago

Hi Team,

I am not able to install the FastTreeSHAP library in Kubeflow, facing below error -

 building 'fasttreeshap._cext' extension
  creating build/temp.linux-x86_64-3.9
  creating build/temp.linux-x86_64-3.9/fasttreeshap
  creating build/temp.linux-x86_64-3.9/fasttreeshap/cext
  x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -c fasttreeshap/cext/_cext.cc -o build/temp.linux-x86_64-3.9/fasttreeshap/cext/_cext.o -fopenmp
  fasttreeshap/cext/_cext.cc:3:10: fatal error: Python.h: No such file or directory
      3 | #include <Python.h>
        |          ^~~~~~~~~~
  compilation terminated.
  error: command '/usr/bin/x86_64-linux-gnu-gcc' failed with exit code 1
  [end of output]

note: This error originates from a subprocess, and is likely not a problem with pip. ERROR: Failed building wheel for fasttreeshap Failed to build fasttreeshap ERROR: Could not build wheels for fasttreeshap, which is required to install pyproject.toml-based projects WARNING: You are using pip version 22.0.4; however, version 23.1.2 is available. You should consider upgrading via the '/usr/bin/python -m pip install --upgrade pip' command.

jlyang1990 commented 1 year ago

@ya-stack It seems that there is an issue with installing the header files and static libraries for python dev. Would you like to try the approaches mentioned in https://stackoverflow.com/questions/21530577/fatal-error-python-h-no-such-file-or-directory or similar posts?

arilwan commented 8 months ago

Using Python3.8 and this what works for me:

sudo apt install libpython3.8-dev

Source: https://stackoverflow.com/a/57698471