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linnabrown / run_dbcan

Run_dbcan V4, using genomes/metagenomes/proteomes of any assembled organisms (prokaryotes, fungi, plants, animals, viruses) to search for CAZymes.
http://bcb.unl.edu/dbCAN2
GNU General Public License v3.0
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Install package conflict Mac M1 #119

Open Daironbio opened 1 year ago

Daironbio commented 1 year ago

Hello! Thanks for the amazing tool you have developed! I have had some issues while trying to install it in my Mac M1 Ventura 13.3. Following the instructions, I installed Conda and used Miniforge for that purpose, then I installed NCBI Blast+. While trying to install the tool in itself, it gives me the following issue:

(base) conda create -n run_dbcan python=3.8 dbcan -c conda-forge -c bioconda

Collecting package metadata (current_repodata.json): done Solving environment: unsuccessful attempt using repodata from current_repodata.json, retrying with next repodata source. Collecting package metadata (repodata.json): done Solving environment: - Found conflicts! Looking for incompatible packages. This can take several minutes. Press CTRL-C to abort. failed

UnsatisfiableError: The following specifications were found to be incompatible with each other:

Output in format: Requested package -> Available versions

Package python conflicts for: dbcan -> biopython -> python[version='>=3.10,<3.11.0a0|>=3.10,<3.11.0a0|>=3.8,<3.9.0a0|>=3.9,<3.10.0a0|>=3.9,<3.10.0a0|>=3.11,<3.12.0a0|>=3.11,<3.12.0a0|>=3.7|>=3.6|>=3.5',build=*_cpython] python=3.8 dbcan -> python

Thanks for you attention

linnabrown commented 9 months ago

I don't have this problem on my own mac os, which is MacOS Monterey