Hello, I am new to github and dbcan. I followed the scripts under run_dbcan4. I initially had errors, but it was because I did not activate conda prior to running the database install. After rerunning with conda activated, I can see the output folder and files when I ran the nucleotide example:
I don't know how to visualize the output files with .out and .gff extensions. Can anyone help with this? Is there another step I need to do or another script I need to run to visualize each output file (dbsub.out, diamond.out, dtemp.out, hmmer.out, prodigal.gff, uniInput)? Thanks.
Hello, I am new to github and dbcan. I followed the scripts under run_dbcan4. I initially had errors, but it was because I did not activate conda prior to running the database install. After rerunning with conda activated, I can see the output folder and files when I ran the nucleotide example:
run_dbcan EscheriaColiK12MG1655.fna prok --out_dir output_EscheriaColiK12MG1655
I don't know how to visualize the output files with .out and .gff extensions. Can anyone help with this? Is there another step I need to do or another script I need to run to visualize each output file (dbsub.out, diamond.out, dtemp.out, hmmer.out, prodigal.gff, uniInput)? Thanks.