fix default eCAMI db_type

linnabrown / run_dbcan

Run_dbcan V4, using genomes/metagenomes/proteomes of any assembled organisms (prokaryotes, fungi, plants, animals, viruses) to search for CAZymes.

http://bcb.unl.edu/dbCAN2

GNU General Public License v3.0

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fix default eCAMI db_type #91

Closed pooranis closed 2 years ago

pooranis commented 2 years ago

Hi, I noticed that the default database for eCAMI was spelled as 'Cazyme' which means it uses the EC database by default (also what is used by the main run_dbcan). Is this intentional? The code is looking for 'CAZyme', so I changed it so it will match against the CAZyme domains by default instead. Thanks!

linnabrown commented 2 years ago

Thank you for the sharp finding!