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linnarsson-lab / loom-viewer

Tool for sharing, browsing and visualizing single-cell data stored in the Loom file format
BSD 2-Clause "Simplified" License
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Update Documentation #81

Open JobLeonard opened 7 years ago

JobLeonard commented 7 years ago

Hey, Khomgrit can't get loompy to work because he keeps getting this error. Loom was installed wit pip install loompy.

I can't look into this myself because I'm working on quasi-broken web-code at the moment, and I don't want to accidentally get that mixed into the stable version.

ghost commented 7 years ago

I had that problem a little while back. I think it's because he's using Python v2 and Loom is written for v3

On 16 Jan 2017 19:29, "Job van der Zwan" notifications@github.com wrote:

Hey, Khomgrit can't get loompy to work because he keeps getting this error. Loom was installed wit pip install loompy.

I can't look into this myself because I'm working on quasi-broken web-code at the moment, and I don't want to accidentally get that mixed into the stable version.

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/linnarsson-lab/Loom/issues/81, or mute the thread https://github.com/notifications/unsubscribe-auth/AOIgronDWtFSZDklr7i_JY7__0bTDroWks5rS8UOgaJpZM4Lk6Ah .

slinnarsson commented 7 years ago

Yes, Loom now requires Python 3.x (probably 3.5)!

As part of our push to 1.0, we (=I) should revise the docs to be accurate...

JobLeonard commented 7 years ago

I probably should start documenting the structure of the web-app too, so others can make sense of it.

JobLeonard commented 6 years ago

Woops...

JobLeonard commented 6 years ago

(Meanwhile @slinnarsson and @gioelelm somehow managed to update the loompy docs just fine. This is embarassing)

JobLeonard commented 6 years ago

Mental note: use Idyll + travis to build docs when they are written (not the in-line ones) http://idyll-lang.org/introduction