linnarsson-lab / loompy

Python implementation of the Loom file format - http://loompy.org
BSD 2-Clause "Simplified" License
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Loompy creating row_attr entries with no value #175

Open ivirshup opened 1 year ago

ivirshup commented 1 year ago

Related to:

scvelo (https://github.com/theislab/scvelo/issues/864#issuecomment-1104750249) and anndata are getting reports of loom files which can't be loaded since one of their row attributes loads as None. Specifically files created with loompy fromfq.

Is this intentional, or should this be considered a bug in loompy?