linsalrob / PhiSpy

Prediction of prophages from bacterial genomes
MIT License
70 stars 21 forks source link

Move all command line argument parsing code in PhiSpy.py to the helper_functions.py file #24

Closed deprekate closed 4 years ago

deprekate commented 4 years ago

Everything is broken for me. I just cloned the master branch to check out the Ochro stuff, and the misc training data code from the latest push is breaking things

pdec commented 4 years ago

That's weird as I used that version to run the Ochro stuff could you provide more details?

linsalrob commented 4 years ago

Phispy is working for me. Is it still broken?

Rob

On Thu, Oct 24, 2019 at 3:09 PM Przemysław Decewicz < notifications@github.com> wrote:

That's weird as I used that version to run the Ochro stuff could you provide more details?

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/linsalrob/PhiSpy/issues/24?email_source=notifications&email_token=AAGMFB3U5Q2FCVSWVP543JDQQIMLDA5CNFSM4JE3RRI2YY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOECGS5ZQ#issuecomment-546123494, or unsubscribe https://github.com/notifications/unsubscribe-auth/AAGMFBYZZPCFCK32Y57FHE3QQIMLDANCNFSM4JE3RRIQ .