search

lisphilar / covid19-sir

CovsirPhy: Python library for COVID-19 analysis with phase-dependent SIR-derived ODE models.
https://lisphilar.github.io/covid19-sir/
Apache License 2.0
109 stars 44 forks source link

Bump scipy from 1.12.0 to 1.13.0 #1632

Closed dependabot[bot] closed 8 months ago

dependabot[bot] commented 8 months ago

Bumps scipy from 1.12.0 to 1.13.0.

Release notes

Sourced from scipy's releases.

SciPy 1.13.0 Release Notes

SciPy 1.13.0 is the culmination of 3 months of hard work. This out-of-band release aims to support NumPy 2.0.0, and is backwards compatible to NumPy 1.22.4. The version of OpenBLAS used to build the PyPI wheels has been increased to 0.3.26.dev.

This release requires Python 3.9+ and NumPy 1.22.4 or greater.

For running on PyPy, PyPy3 6.0+ is required.

Highlights of this release

  • Support for NumPy 2.0.0.
  • Interactive examples have been added to the documentation, allowing users to run the examples locally on embedded Jupyterlite notebooks in their browser.
  • Preliminary 1D array support for the COO and DOK sparse formats.
  • Several scipy.stats functions have gained support for additional axis, nan_policy, and keepdims arguments. scipy.stats also has several performance and accuracy improvements.

New features

scipy.integrate improvements

  • The terminal attribute of scipy.integrate.solve_ivp events callables now additionally accepts integer values to specify a number of occurrences required for termination, rather than the previous restriction of only accepting a bool value to terminate on the first registered event.

scipy.io improvements

  • scipy.io.wavfile.write has improved dtype input validation.

scipy.interpolate improvements

  • The Modified Akima Interpolation has been added to interpolate.Akima1DInterpolator, available via the new method argument.
  • New method BSpline.insert_knot inserts a knot into a BSpline instance. This routine is similar to the module-level scipy.interpolate.insert function, and works with the BSpline objects instead of tck tuples.

... (truncated)

Commits
  • 7dcd8c5 REL: 1.13.0 release commit [wheel build]
  • 15a69da Merge pull request #20375 from tylerjereddy/treddy_prep_1_13_0_final
  • 4cbb9e8 DOC: PR 20375 revisions
  • 2431661 MAINT: PR 20375 revisions [wheel build]
  • b85940a DOC, REL: set 1.13.0 final unreleased
  • 13c30bd MAINT: spatial: simplify meson.build
  • abb04b2 MAINT: spatial: use cython_lapack in spatial/_qhull.pyx
  • 729ff0f BUG: interpolate: Fix wrong warning message if degree=-1 in `interpolate.RBFI...
  • 8d82b0a MAINT, BUG: bump OpenBLAS (#20362)
  • 0e67a72 MAINT: backport amos license update
  • Additional commits viewable in compare view


Dependabot compatibility score

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.

Dependabot commands and options
You can trigger Dependabot actions by commenting on this PR: - `@dependabot rebase` will rebase this PR - `@dependabot recreate` will recreate this PR, overwriting any edits that have been made to it - `@dependabot merge` will merge this PR after your CI passes on it - `@dependabot squash and merge` will squash and merge this PR after your CI passes on it - `@dependabot cancel merge` will cancel a previously requested merge and block automerging - `@dependabot reopen` will reopen this PR if it is closed - `@dependabot close` will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually - `@dependabot show ignore conditions` will show all of the ignore conditions of the specified dependency - `@dependabot ignore this major version` will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this minor version` will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this dependency` will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)
codecov[bot] commented 8 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 91.73%. Comparing base (9d2fbab) to head (227fa5b).

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #1632 +/- ## ======================================= Coverage 91.73% 91.73% ======================================= Files 43 43 Lines 2807 2807 Branches 299 299 ======================================= Hits 2575 2575 Misses 213 213 Partials 19 19 ```

:umbrella: View full report in Codecov by Sentry.
:loudspeaker: Have feedback on the report? Share it here.