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liulab-dfci / CHIPS

A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data
MIT License
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KeyError Unnamed chips.snakefile #10

Open covavara opened 2 years ago

covavara commented 2 years ago

Hi, I am trying to use chips to analyse some ChIP-seq data. I have managed to troubleshoot most of the errors, but I think there is something wrong when calling all the inputs to compile in the chips.snakefile. The error I get is:

InputFunctionException in line 242 of /Users/cvara/Documents/PD2.0/ChIPseq/Analysis/PROJECT/cidc_chips/chips.snakefile: KeyError: 'Unnamed:' Wildcards:

Can you help me? Thank you!

BFortunato1 commented 2 years ago

Hi covavara, were you able to solve this? I'm having the same issue.