We are trying to get MAESTRO running for both some mouse and some rat scRNA-Seq data. In looking at this tutorial: https://baigal628.github.io/MAESTRO_documentation/scrna.html the only options for --species is GRCh38 or GRCm38. I don't see anything obvious about how to make custom reference files for other species. Is this possible?
Hello,
We are trying to get MAESTRO running for both some mouse and some rat scRNA-Seq data. In looking at this tutorial: https://baigal628.github.io/MAESTRO_documentation/scrna.html the only options for
--speciesis GRCh38 or GRCm38. I don't see anything obvious about how to make custom reference files for other species. Is this possible?Thanks, Jenny
@katiejchai