Open lisch7 opened 7 months ago
Now the infomation of RIMA enviroment was as follows:
$ conda list
# packages in environment at /home/mailab003/biosoft/miniconda3/envs/RIMA:
#
# Name Version Build Channel
_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 2_gnu conda-forge
_r-mutex 1.0.1 anacondar_1 conda-forge
_tflow_select 2.3.0 mkl https://mirrors.bfsu.edu.cn/anaconda/pkgs/main
absl-py 2.0.0 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
aioeasywebdav 2.4.0 py36h5fab9bb_1001 conda-forge
aiohttp 3.7.4.post0 py36h8f6f2f9_0 conda-forge
appdirs 1.4.4 pyh9f0ad1d_0 conda-forge
astor 0.8.1 pyh9f0ad1d_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
astunparse 1.6.3 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
async-timeout 3.0.1 py_1000 conda-forge
atk-1.0 2.38.0 hd4edc92_1 conda-forge
attrs 22.2.0 pyh71513ae_0 conda-forge
backports 1.0 pyhd8ed1ab_3 conda-forge
backports.functools_lru_cache 2.0.0 pyhd8ed1ab_0 conda-forge
bbmap 39.01 h92535d8_1 bioconda
bcrypt 3.2.0 py36h8f6f2f9_1 conda-forge
bedtools 2.29.1 hc088bd4_1 bioconda
binutils_impl_linux-64 2.33.1 he1b5a44_7 conda-forge
binutils_linux-64 2.33.1 h9595d00_17 conda-forge
biopython 1.76 py36h516909a_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
blas 1.0 mkl conda-forge
blast 2.15.0 pl5321h6f7f691_1 bioconda
blinker 1.5 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
boto3 1.21.32 pyhd8ed1ab_0 conda-forge
botocore 1.24.32 pyhd3eb1b0_0 anaconda
bowtie 1.3.1 py36h769816f_3 bioconda
brotlipy 0.7.0 py36h8f6f2f9_1001 conda-forge
bwidget 1.9.14 ha770c72_1 conda-forge
bzip2 1.0.8 hd590300_5 conda-forge
c-ares 1.26.0 hd590300_0 conda-forge
ca-certificates 2023.11.17 hbcca054_0 conda-forge
cachetools 5.0.0 pyhd8ed1ab_0 conda-forge
cairo 1.16.0 h18b612c_1001 conda-forge
certifi 2021.5.30 py36h5fab9bb_0 conda-forge
cffi 1.14.6 py36hd8eec40_1 conda-forge
chardet 4.0.0 py36h5fab9bb_1 conda-forge
charset-normalizer 2.1.1 pyhd8ed1ab_0 conda-forge
click 8.0.1 py36h5fab9bb_0 conda-forge
coloredlogs 15.0.1 py36h5fab9bb_1 conda-forge
colormath 3.0.0 py_2 conda-forge
configargparse 1.7 pyhd8ed1ab_0 conda-forge
cryptography 35.0.0 py36hb60f036_0 conda-forge
curl 7.87.0 h6312ad2_0 conda-forge
cycler 0.11.0 pyhd8ed1ab_0 conda-forge
dataclasses 0.8 pyh787bdff_2 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
datrie 0.8.2 py36h8f6f2f9_2 conda-forge
decorator 4.4.2 py_0 conda-forge
defusedxml 0.7.1 pyhd8ed1ab_0 conda-forge
docutils 0.17.1 py36h5fab9bb_0 conda-forge
dropbox 11.36.2 pyhd8ed1ab_0 conda-forge
entrez-direct 16.2 he881be0_1 bioconda
expat 2.5.0 hcb278e6_1 conda-forge
fftw 3.3.9 h27cfd23_1 anaconda
filechunkio 1.6 py36_0 bioconda
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 3.000 h77eed37_0 conda-forge
font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge
font-ttf-ubuntu 0.83 h77eed37_1 conda-forge
fontconfig 2.14.2 h14ed4e7_0 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
freetype 2.12.1 h267a509_2 conda-forge
fribidi 1.0.10 h36c2ea0_0 conda-forge
ftputil 3.2 py36_0 bioconda
future 0.18.2 py36h5fab9bb_3 conda-forge
gast 0.3.3 py_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
gatk4 4.1.4.1 0 bioconda
gcc_impl_linux-64 7.3.0 habb00fd_1 defaults
gcc_linux-64 7.3.0 h553295d_17 conda-forge
gdk-pixbuf 2.42.8 hff1cb4f_1 conda-forge
gettext 0.21.1 h27087fc_0 conda-forge
gfortran_impl_linux-64 7.3.0 hdf63c60_1 anaconda
gfortran_linux-64 7.3.0 h553295d_17 conda-forge
ghostscript 9.18 1 bioconda
giflib 5.2.1 h0b41bf4_3 conda-forge
gitdb 4.0.10 pyhd8ed1ab_0 conda-forge
gitpython 3.1.18 pyhd8ed1ab_0 conda-forge
glib 2.78.3 hfc55251_0 conda-forge
glib-tools 2.78.3 hfc55251_0 conda-forge
gmap 2023.10.10 h9d449c0_1 bioconda
google-api-core 2.8.0 pyhd8ed1ab_1 conda-forge
google-auth 2.23.0 pyh1a96a4e_0 conda-forge
google-auth-oauthlib 0.4.6 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
google-cloud-core 2.3.1 pyhd8ed1ab_0 conda-forge
google-cloud-storage 2.10.0 pyh1a96a4e_0 conda-forge
google-crc32c 1.1.2 py36h0208b43_0 conda-forge
google-pasta 0.2.0 pyh8c360ce_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
google-resumable-media 2.3.3 pyhd8ed1ab_0 conda-forge
googleapis-common-protos 1.53.0 py36h5fab9bb_0 conda-forge
graphite2 1.3.14 h295c915_1 anaconda
graphviz 2.50.0 h8e749b2_2 conda-forge
grpcio 1.38.1 py36h8e87921_0 conda-forge
gtk2 2.24.33 h90689f9_2 conda-forge
gts 0.7.6 h977cf35_4 conda-forge
gxx_impl_linux-64 7.3.0 hdf63c60_1 anaconda
gxx_linux-64 7.3.0 h553295d_17 conda-forge
h5py 2.10.0 py36h7918eee_0 https://mirrors.bfsu.edu.cn/anaconda/pkgs/main
harfbuzz 4.3.0 hf52aaf7_1 anaconda
hdf5 1.10.4 nompi_h3c11f04_1106 conda-forge
htslib 1.9 h244ad75_9 bioconda
humanfriendly 10.0 py36h5fab9bb_0 conda-forge
icu 58.2 hf484d3e_1000 conda-forge
idna 3.6 pyhd8ed1ab_0 conda-forge
idna_ssl 1.1.0 pyhd8ed1ab_1002 conda-forge
imagemagick 7.1.0_7 pl5321hb118871_0 conda-forge
importlib-metadata 4.8.1 py36h5fab9bb_0 conda-forge
intel-openmp 2023.1.0 hdb19cb5_46306 anaconda
jbig 2.1 h7f98852_2003 conda-forge
jemalloc 5.3.0 hcb278e6_0 conda-forge
jinja2 3.0.3 pyhd8ed1ab_0 conda-forge
jmespath 0.10.0 pyh9f0ad1d_0 conda-forge
joblib 1.2.0 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
jpeg 9e h0b41bf4_3 conda-forge
jsonschema 4.1.2 pyhd8ed1ab_0 conda-forge
kallisto 0.46.0 hb6a4e58_0 bioconda
keras-preprocessing 1.1.2 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
keyutils 1.6.1 h166bdaf_0 conda-forge
kiwisolver 1.3.1 py36h605e78d_1 conda-forge
krb5 1.20.1 hf9c8cef_0 conda-forge
ld_impl_linux-64 2.33.1 h53a641e_7 conda-forge
lerc 4.0.0 h27087fc_0 conda-forge
libblas 3.9.0 1_h6e990d7_netlib https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
libboost 1.73.0 h28710b8_12 anaconda
libcblas 3.9.0 3_h893e4fe_netlib https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
libcrc32c 1.1.2 h9c3ff4c_0 conda-forge
libcurl 7.87.0 h6312ad2_0 conda-forge
libdb 6.2.32 h9c3ff4c_0 conda-forge
libdeflate 1.14 h166bdaf_0 conda-forge
libedit 3.1.20191231 h46ee950_2 conda-forge
libev 4.33 hd590300_2 conda-forge
libexpat 2.5.0 hcb278e6_1 conda-forge
libffi 3.4.2 h7f98852_5 conda-forge
libgcc 7.2.0 h69d50b8_2 conda-forge
libgcc-ng 13.2.0 h807b86a_4 conda-forge
libgd 2.3.3 h695aa2c_1 anaconda
libgfortran-ng 7.5.0 h14aa051_20 conda-forge
libgfortran4 7.5.0 h14aa051_20 conda-forge
libglib 2.78.3 h783c2da_0 conda-forge
libgomp 13.2.0 h807b86a_4 conda-forge
libiconv 1.17 hd590300_2 conda-forge
libidn2 2.3.7 hd590300_0 conda-forge
libjemalloc 5.3.0 hcb278e6_0 conda-forge
libnghttp2 1.51.0 hdcd2b5c_0 conda-forge
libpng 1.6.39 h753d276_0 conda-forge
libprotobuf 3.18.0 h780b84a_1 conda-forge
librsvg 2.54.4 h7abd40a_0 conda-forge
libsodium 1.0.18 h36c2ea0_1 conda-forge
libsqlite 3.44.2 h2797004_0 conda-forge
libssh2 1.10.0 haa6b8db_3 conda-forge
libstdcxx-ng 13.2.0 h7e041cc_4 conda-forge
libtiff 4.4.0 h82bc61c_5 conda-forge
libtool 2.4.7 h27087fc_0 conda-forge
libunistring 0.9.10 h7f98852_0 conda-forge
libuuid 2.38.1 h0b41bf4_0 conda-forge
libwebp 1.3.2 h11a3e52_0 anaconda
libwebp-base 1.3.2 hd590300_0 conda-forge
libxcb 1.15 h0b41bf4_0 conda-forge
libxcrypt 4.4.36 hd590300_1 conda-forge
libxml2 2.9.14 h74e7548_0 anaconda
libzlib 1.2.13 hd590300_5 conda-forge
llvm-openmp 8.0.1 hc9558a2_0 conda-forge
lzstring 1.0.4 py_1001 conda-forge
markdown 3.5.2 pyhd8ed1ab_0 conda-forge
markupsafe 2.0.1 py36h8f6f2f9_0 conda-forge
matplotlib-base 3.1.3 py36hef1b27d_0 anaconda
mhcflurry 2.0.1 pyh864c0ab_0 https://mirrors.bfsu.edu.cn/anaconda/cloud/bioconda
mhcnames 0.4.8 pyh864c0ab_1 https://mirrors.bfsu.edu.cn/anaconda/cloud/bioconda
mkl 2019.4 243 anaconda
mkl-service 2.3.0 py36h516909a_0 conda-forge
mkl_fft 1.1.0 py36hc1659b7_1 conda-forge
mkl_random 1.1.0 py36hb3f55d8_0 conda-forge
msisensor 0.5 hd0b41b6_0 bioconda
multidict 5.2.0 py36h8f6f2f9_0 conda-forge
multiqc 1.9 py_1 bioconda
ncbi-vdb 3.0.10 hdbdd923_0 bioconda
ncurses 6.1 hf484d3e_1002 conda-forge
networkx 2.5.1 pyhd8ed1ab_0 conda-forge
np_utils 0.5.12.1 pyh9f0ad1d_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
numpy 1.19.1 py36hbc911f0_0 anaconda
numpy-base 1.19.1 py36hfa32c7d_0 anaconda
oauthlib 3.2.2 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
openjdk 8.0.382 hd590300_0 conda-forge
openjpeg 2.5.0 h7d73246_1 conda-forge
openmp 8.0.1 0 conda-forge
openssl 1.1.1w hd590300_0 conda-forge
opt_einsum 3.3.0 pyhc1e730c_2 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
ossuuid 1.6.2 hf484d3e_1000 conda-forge
pandas 1.0.5 pypi_0 pypi
pango 1.50.7 hbd2fdc8_0 conda-forge
paramiko 2.12.0 pyhd8ed1ab_0 conda-forge
pbzip2 1.1.13 h1fcc475_2 conda-forge
pcre 8.45 h9c3ff4c_0 conda-forge
pcre2 10.42 hcad00b1_0 conda-forge
perl 5.32.1 7_hd590300_perl5 conda-forge
perl-alien-build 2.48 pl5321hec16e2b_0 bioconda
perl-alien-libxml2 0.17 pl5321hec16e2b_0 bioconda
perl-archive-tar 2.40 pl5321hdfd78af_0 bioconda
perl-business-isbn 3.007 pl5321hdfd78af_0 bioconda
perl-business-isbn-data 20210112.006 pl5321hdfd78af_0 bioconda
perl-capture-tiny 0.48 pl5321hdfd78af_2 bioconda
perl-carp 1.38 pl5321hdfd78af_4 bioconda
perl-common-sense 3.75 pl5321hdfd78af_0 bioconda
perl-compress-raw-bzip2 2.201 pl5321h87f3376_1 bioconda
perl-compress-raw-zlib 2.105 pl5321h87f3376_0 bioconda
perl-constant 1.33 pl5321hdfd78af_2 bioconda
perl-data-dumper 2.183 pl5321hec16e2b_1 bioconda
perl-db-file 1.855 pl5321h779adbc_1 bioconda
perl-encode 3.19 pl5321hec16e2b_1 bioconda
perl-exporter 5.72 pl5321hdfd78af_2 bioconda
perl-exporter-tiny 1.002002 pl5321hdfd78af_0 bioconda
perl-extutils-makemaker 7.70 pl5321hd8ed1ab_0 conda-forge
perl-ffi-checklib 0.28 pl5321hdfd78af_0 bioconda
perl-file-chdir 0.1010 pl5321hdfd78af_3 bioconda
perl-file-path 2.18 pl5321hd8ed1ab_0 conda-forge
perl-file-temp 0.2304 pl5321hd8ed1ab_0 conda-forge
perl-file-util 4.201720 pl5321hdfd78af_0 bioconda
perl-file-which 1.24 pl5321hd8ed1ab_0 conda-forge
perl-importer 0.026 pl5321hdfd78af_0 bioconda
perl-io-compress 2.201 pl5321hdbdd923_2 bioconda
perl-io-gzip 0.20 pl5321h7132678_4 bioconda
perl-io-zlib 1.14 pl5321hdfd78af_0 bioconda
perl-json 4.10 pl5321hdfd78af_0 bioconda
perl-json-xs 2.34 pl5321h4ac6f70_6 bioconda
perl-lib 0.63 pl5321hdfd78af_2 bioconda
perl-list-moreutils 0.430 pl5321hdfd78af_0 bioconda
perl-list-moreutils-xs 0.430 pl5321h031d066_2 bioconda
perl-mime-base64 3.16 pl5321hec16e2b_2 bioconda
perl-parent 0.236 pl5321hdfd78af_2 bioconda
perl-path-tiny 0.122 pl5321hdfd78af_0 bioconda
perl-pathtools 3.75 pl5321hec16e2b_3 bioconda
perl-scalar-list-utils 1.62 pl5321hec16e2b_1 bioconda
perl-scope-guard 0.21 pl5321hdfd78af_3 bioconda
perl-set-intervaltree 0.12 pl5321hdbdd923_3 bioconda
perl-sub-info 0.002 pl5321hdfd78af_1 bioconda
perl-term-table 0.016 pl5321hdfd78af_0 bioconda
perl-test2-suite 0.000145 pl5321hdfd78af_0 bioconda
perl-types-serialiser 1.01 pl5321hdfd78af_0 bioconda
perl-uri 5.12 pl5321hdfd78af_0 bioconda
perl-xml-libxml 2.0207 pl5321h661654b_0 bioconda
perl-xml-namespacesupport 1.12 pl5321hdfd78af_1 bioconda
perl-xml-sax 1.02 pl5321hdfd78af_1 bioconda
perl-xml-sax-base 1.09 pl5321hdfd78af_1 bioconda
picard 2.21.4 0 bioconda
pigz 2.4 h84994c4_0 anaconda
pip 20.2.2 py36_0 anaconda
pixman 0.38.0 h516909a_1003 conda-forge
pkg-config 0.29.2 h36c2ea0_1008 conda-forge
ply 3.11 py_1 conda-forge
prettytable 2.5.0 pyhd8ed1ab_0 conda-forge
progressbar33 2.4 py_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
protobuf 3.18.0 py36hc4f0c31_0 conda-forge
psutil 5.8.0 py36h8f6f2f9_1 conda-forge
pthread-stubs 0.4 h36c2ea0_1001 conda-forge
pyasn1 0.5.1 pyhd8ed1ab_0 conda-forge
pyasn1-modules 0.3.0 pyhd8ed1ab_0 conda-forge
pybigwig 0.3.17 py36hc013797_0 bioconda
pycparser 2.21 pyhd8ed1ab_0 conda-forge
pygments 2.14.0 pyhd8ed1ab_0 conda-forge
pygraphviz 1.3.1 py36_0 bioconda
pyjwt 2.8.0 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
pynacl 1.4.0 py36h8f6f2f9_2 conda-forge
pyopenssl 22.0.0 pyhd8ed1ab_1 conda-forge
pyparsing 3.1.1 pyhd8ed1ab_0 conda-forge
pyrsistent 0.17.3 py36h8f6f2f9_2 conda-forge
pysam 0.8.3 py36h84994c4_6 bioconda
pysftp 0.2.9 py36_0 bioconda
pysocks 1.7.1 py36h5fab9bb_3 conda-forge
python 3.6.10 h0371630_0 anaconda
python-dateutil 2.8.2 pyhd8ed1ab_0 conda-forge
python-irodsclient 1.1.9 pyhd8ed1ab_0 conda-forge
python_abi 3.6 2_cp36m conda-forge
pytz 2023.3.post1 pyhd8ed1ab_0 conda-forge
pyu2f 0.1.5 pyhd8ed1ab_0 conda-forge
pyyaml 5.4.1 py36h8f6f2f9_1 conda-forge
r-base 3.4.3 h9bb98a2_5 defaults
ratelimiter 1.2.0 pyhd8ed1ab_1003 conda-forge
readline 7.0 hf8c457e_1001 conda-forge
requests 2.28.1 pyhd8ed1ab_0 conda-forge
requests-oauthlib 1.3.1 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
rsa 3.1.4 py36_0 bioconda
s3transfer 0.5.2 pyhd8ed1ab_0 conda-forge
salmon 0.13.1 h86b0361_0 bioconda
sambamba 0.6.6 2 bioconda
samtools 1.9 h10a08f8_12 bioconda
scikit-learn 0.24.0 py36he4fde30_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
scipy 1.5.0 py36h0b6359f_0 anaconda
setuptools 58.0.4 py36h5fab9bb_2 conda-forge
simplejson 3.8.1 py36_0 bioconda
six 1.16.0 pyh6c4a22f_0 conda-forge
smmap 3.0.5 pyh44b312d_0 conda-forge
snakemake 5.5.4 2 bioconda
snakemake-minimal 5.5.4 py_2 bioconda
spectra 0.0.11 py_1 conda-forge
sqlite 3.31.1 h7b6447c_0 anaconda
star 2.6.1d 0 bioconda
star-fusion 1.5.0 0 bioconda
stone 3.3.1 pyhd8ed1ab_0 conda-forge
tbb 2020.2 h4bd325d_4 conda-forge
tensorboard 2.11.2 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
tensorboard-data-server 0.6.0 py36hc39840e_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
tensorboard-plugin-wit 1.8.1 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
tensorflow 2.2.0 mkl_py36h5a57954_0 https://mirrors.bfsu.edu.cn/anaconda/pkgs/main
tensorflow-base 2.2.0 mkl_py36hd506778_0 https://mirrors.bfsu.edu.cn/anaconda/pkgs/main
tensorflow-estimator 2.6.0 py36hc4f0c31_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
termcolor 1.1.0 pyhd8ed1ab_3 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
threadpoolctl 3.1.0 pyh8a188c0_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
tidepy 1.3.6 pypi_0 pypi
tk 8.6.13 noxft_h4845f30_101 conda-forge
tktable 2.10 h0c5db8f_5 conda-forge
tornado 6.1 py36h8f6f2f9_1 conda-forge
tqdm 4.7.2 py36_0 https://mirrors.bfsu.edu.cn/anaconda/cloud/bioconda
trust4 1.0.5.1 h2e03b76_0 bioconda
typing-extensions 4.1.1 hd8ed1ab_0 conda-forge
typing_extensions 4.1.1 pyha770c72_0 conda-forge
urllib3 1.26.15 pyhd8ed1ab_0 conda-forge
wcwidth 0.2.10 pyhd8ed1ab_0 conda-forge
werkzeug 2.0.2 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
wget 1.20.3 ha56f1ee_1 conda-forge
wheel 0.37.1 pyhd8ed1ab_0 conda-forge
wrapt 1.13.1 py36h8f6f2f9_0 conda-forge
xorg-kbproto 1.0.7 h7f98852_1002 conda-forge
xorg-libice 1.1.1 hd590300_0 conda-forge
xorg-libsm 1.2.4 h7391055_0 conda-forge
xorg-libx11 1.8.7 h8ee46fc_0 conda-forge
xorg-libxau 1.0.11 hd590300_0 conda-forge
xorg-libxdmcp 1.1.3 h7f98852_0 conda-forge
xorg-libxext 1.3.4 h0b41bf4_2 conda-forge
xorg-libxrender 0.9.11 hd590300_0 conda-forge
xorg-libxt 1.3.0 hd590300_1 conda-forge
xorg-renderproto 0.11.1 h7f98852_1002 conda-forge
xorg-xextproto 7.3.0 h0b41bf4_1003 conda-forge
xorg-xproto 7.0.31 h7f98852_1007 conda-forge
xz 5.2.6 h166bdaf_0 conda-forge
yaml 0.2.5 h7f98852_2 conda-forge
yarl 1.6.3 py36h8f6f2f9_2 conda-forge
zipp 3.6.0 pyhd8ed1ab_0 conda-forge
zlib 1.2.13 hd590300_5 conda-forge
zstd 1.5.5 hfc55251_0 conda-forge
$ pip list
Package Version
----------------------------- ------------
absl-py 2.0.0
aioeasywebdav 2.4.0
aiohttp 3.7.4.post0
appdirs 1.4.4
astor 0.8.1
astunparse 1.6.3
async-timeout 3.0.1
attrs 22.2.0
backports.functools-lru-cache 2.0.0
bcrypt 3.2.0
biopython 1.76
blinker 1.5
boto3 1.21.32
botocore 1.24.32
brotlipy 0.7.0
cachetools 5.0.0
certifi 2021.5.30
cffi 1.14.6
chardet 4.0.0
charset-normalizer 2.1.1
click 8.0.1
coloredlogs 15.0.1
colormath 3.0.0
ConfigArgParse 1.7
cryptography 35.0.0
cycler 0.11.0
dataclasses 0.8
datrie 0.8.2
decorator 4.4.2
defusedxml 0.7.1
docutils 0.17.1
dropbox 11.36.2
filechunkio 1.6
ftputil 3.2
future 0.18.2
gast 0.3.3
gitdb 4.0.10
GitPython 3.1.18
google-api-core 2.8.0
google-auth 2.23.0
google-auth-oauthlib 0.4.6
google-cloud-core 2.3.1
google-cloud-storage 2.10.0
google-crc32c 1.1.2
google-pasta 0.2.0
google-resumable-media 2.3.3
googleapis-common-protos 1.53.0
grpcio 1.38.1
h5py 2.10.0
humanfriendly 10.0
idna 3.6
idna-ssl 1.1.0
importlib-metadata 4.8.1
Jinja2 3.0.3
jmespath 0.10.0
joblib 1.2.0
jsonschema 4.1.2
Keras-Preprocessing 1.1.2
kiwisolver 1.3.1
lzstring 1.0.4
Markdown 3.5.2
MarkupSafe 2.0.1
matplotlib 3.1.3
mhcflurry 2.0.1
mhcnames 0.4.8
mkl-fft 1.1.0
mkl-random 1.1.0
mkl-service 2.3.0
multidict 5.2.0
multiqc 1.9
networkx 2.5.1
np-utils 0.5.12.1
numpy 1.19.1
oauthlib 3.2.2
opt-einsum 3.3.0
pandas 1.0.5
paramiko 2.12.0
pip 20.2.2
ply 3.11
prettytable 2.5.0
progressbar33 2.4
protobuf 3.18.0
psutil 5.8.0
pyasn1 0.5.1
pyasn1-modules 0.3.0
pyBigWig 0.3.17
pycparser 2.21
Pygments 2.14.0
pygraphviz 1.3.1
PyJWT 2.8.0
PyNaCl 1.4.0
pyOpenSSL 22.0.0
pyparsing 3.1.1
pyrsistent 0.17.3
pysam 0.8.3
pysftp 0.2.9
PySocks 1.7.1
python-dateutil 2.8.2
python-irodsclient 1.1.9
pytz 2023.3.post1
pyu2f 0.1.5
PyYAML 5.4.1
ratelimiter 1.2.0
requests 2.28.1
requests-oauthlib 1.3.1
rsa 3.1.4
s3transfer 0.5.2
scikit-learn 0.24.0
scipy 1.5.0
setuptools 58.0.4
simplejson 3.8.1
six 1.16.0
smmap 3.0.5
snakemake 5.5.4
spectra 0.0.11
stone 3.3.1
tensorboard 2.11.2
tensorboard-data-server 0.6.0
tensorboard-plugin-wit 1.8.1
tensorflow 2.2.0
tensorflow-estimator 2.6.0
termcolor 1.1.0
threadpoolctl 3.1.0
tidepy 1.3.6
tornado 6.1
tqdm 4.7.2
typing-extensions 4.1.1
urllib3 1.26.15
wcwidth 0.2.10
Werkzeug 2.0.2
wheel 0.37.1
wrapt 1.13.1
yarl 1.6.3
zipp 3.6.0
I run out to the same issue.
I tried to install RIMA for many times. Finally, I installed three environments successfully and worked fine. The environment named "stat_perl_r" always could not work fine. I listed my environment of RIMA for you @sunqiangzai to be a reference:
conda list
# packages in environment at /home/mailab003/biosoft/miniconda3/envs/RIMA:
#
# Name Version Build Channel
_libgcc_mutex 0.1 conda_forge https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
_openmp_mutex 4.5 2_gnu https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
_r-mutex 1.0.1 anacondar_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
_tflow_select 2.3.0 mkl https://mirrors.bfsu.edu.cn/anaconda/pkgs/main
absl-py 1.4.0 pypi_0 pypi
aioeasywebdav 2.4.0 py36h5fab9bb_1001 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
aiohttp 3.7.4.post0 py36h8f6f2f9_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
appdirs 1.4.4 pyh9f0ad1d_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
astor 0.8.1 pyh9f0ad1d_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
astroid 2.5.6 py36h06a4308_1 https://mirrors.bfsu.edu.cn/anaconda/pkgs/main
astunparse 1.6.3 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
async-timeout 3.0.1 py_1000 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
atk-1.0 2.38.0 hd4edc92_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
attrs 22.2.0 pyh71513ae_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
backports 1.0 pyhd8ed1ab_3 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
backports.functools_lru_cache 2.0.0 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
bbmap 39.01 h92535d8_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
bcrypt 3.2.0 py36h8f6f2f9_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
bedtools 2.29.1 hc088bd4_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
binutils_impl_linux-64 2.33.1 he1b5a44_7 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
binutils_linux-64 2.33.1 h9595d00_17 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
biopython 1.76 py36h516909a_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
blas 1.0 mkl https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
blast 2.15.0 pl5321h6f7f691_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
blinker 1.5 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
boto3 1.21.32 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
botocore 1.24.32 pyhd3eb1b0_0 anaconda
bowtie 1.3.1 py36h769816f_3 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
brotlipy 0.7.0 py36h8f6f2f9_1001 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
bwidget 1.9.14 ha770c72_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
bzip2 1.0.8 hd590300_5 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
c-ares 1.26.0 hd590300_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
ca-certificates 2023.11.17 hbcca054_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
cachetools 4.2.4 pypi_0 pypi
cairo 1.16.0 h18b612c_1001 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
certifi 2021.5.30 py36h5fab9bb_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
cffi 1.14.6 py36hd8eec40_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
chardet 4.0.0 py36h5fab9bb_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
charset-normalizer 2.0.12 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
click 8.0.1 py36h5fab9bb_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
colorama 0.4.5 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
coloredlogs 15.0.1 py36h5fab9bb_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
colormath 3.0.0 py_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
configargparse 1.7 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
cryptography 35.0.0 py36hb60f036_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
curl 7.87.0 h6312ad2_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
cycler 0.11.0 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
datacache 1.1.5 py_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
dataclasses 0.8 pyh787bdff_2 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
datrie 0.8.2 py36h8f6f2f9_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
decorator 4.4.2 py_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
defusedxml 0.7.1 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
docutils 0.17.1 py36h5fab9bb_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
dropbox 11.36.2 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
entrez-direct 16.2 he881be0_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
expat 2.5.0 hcb278e6_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
fftw 3.3.9 h27cfd23_1 anaconda
filechunkio 1.6 py36_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
font-ttf-inconsolata 3.000 h77eed37_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
font-ttf-source-code-pro 2.038 h77eed37_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
font-ttf-ubuntu 0.83 h77eed37_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
fontconfig 2.14.2 h14ed4e7_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
fonts-conda-ecosystem 1 0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
fonts-conda-forge 1 0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
freetype 2.12.1 h267a509_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
fribidi 1.0.10 h36c2ea0_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
ftputil 3.2 py36_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
future 0.18.2 py36h5fab9bb_3 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
gast 0.3.3 py_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
gatk4 4.1.4.1 0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
gcc_impl_linux-64 7.3.0 habb00fd_1 defaults
gcc_linux-64 7.3.0 h553295d_17 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
gdk-pixbuf 2.42.8 hff1cb4f_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
gettext 0.21.1 h27087fc_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
gfortran_impl_linux-64 7.3.0 hdf63c60_1 anaconda
gfortran_linux-64 7.3.0 h553295d_17 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
ghostscript 9.18 1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
giflib 5.2.1 h0b41bf4_3 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
gitdb 4.0.10 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
gitpython 3.1.18 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
glib 2.78.3 hfc55251_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
glib-tools 2.78.3 hfc55251_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
gmap 2023.10.10 h9d449c0_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
google-api-core 2.8.0 pyhd8ed1ab_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
google-auth 1.35.0 pypi_0 pypi
google-auth-oauthlib 0.4.6 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
google-cloud-core 2.3.1 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
google-cloud-storage 2.10.0 pyh1a96a4e_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
google-crc32c 1.1.2 py36h0208b43_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
google-pasta 0.2.0 pyh8c360ce_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
google-resumable-media 2.3.3 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
googleapis-common-protos 1.53.0 py36h5fab9bb_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
graphite2 1.3.14 h295c915_1 anaconda
graphviz 2.50.0 h8e749b2_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
grpcio 1.38.1 py36h8e87921_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
gtfparse 1.2.1 pyh864c0ab_0 https://mirrors.bfsu.edu.cn/anaconda/cloud/bioconda
gtk2 2.24.33 h90689f9_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
gts 0.7.6 h977cf35_4 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
gxx_impl_linux-64 7.3.0 hdf63c60_1 anaconda
gxx_linux-64 7.3.0 h553295d_17 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
h5py 2.10.0 py36h7918eee_0 https://mirrors.bfsu.edu.cn/anaconda/pkgs/main
harfbuzz 4.3.0 hf52aaf7_1 anaconda
hdf5 1.10.4 nompi_h3c11f04_1106 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
htslib 1.9 h244ad75_9 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
humanfriendly 10.0 py36h5fab9bb_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
icu 58.2 hf484d3e_1000 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
idna 3.6 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
idna_ssl 1.1.0 pyhd8ed1ab_1002 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
imagemagick 7.1.0_7 pl5321hb118871_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
importlib-metadata 4.8.1 py36h5fab9bb_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
intel-openmp 2023.1.0 hdb19cb5_46306 anaconda
isort 5.10.1 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
jbig 2.1 h7f98852_2003 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
jemalloc 5.3.0 hcb278e6_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
jinja2 3.0.3 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
jmespath 0.10.0 pyh9f0ad1d_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
joblib 1.0.1 pyhd3eb1b0_0 anaconda
jpeg 9e h0b41bf4_3 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
jsonschema 4.1.2 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
kallisto 0.46.0 hb6a4e58_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
keras 2.4.3 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
keras-preprocessing 1.1.2 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
keyutils 1.6.1 h166bdaf_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
kiwisolver 1.3.1 py36h605e78d_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
krb5 1.20.1 hf9c8cef_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
lazy-object-proxy 1.6.0 py36h8f6f2f9_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
ld_impl_linux-64 2.33.1 h53a641e_7 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
lerc 4.0.0 h27087fc_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libblas 3.9.0 1_h6e990d7_netlib https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
libboost 1.73.0 h28710b8_12 anaconda
libcblas 3.9.0 3_h893e4fe_netlib https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
libcrc32c 1.1.2 h9c3ff4c_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libcurl 7.87.0 h6312ad2_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libdb 6.2.32 h9c3ff4c_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libdeflate 1.14 h166bdaf_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libedit 3.1.20191231 h46ee950_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libev 4.33 hd590300_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libexpat 2.5.0 hcb278e6_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libffi 3.4.2 h7f98852_5 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libgcc 7.2.0 h69d50b8_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libgcc-ng 13.2.0 h807b86a_4 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libgd 2.3.3 h695aa2c_1 anaconda
libgfortran-ng 7.5.0 h14aa051_20 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libgfortran4 7.5.0 h14aa051_20 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libglib 2.78.3 h783c2da_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libgomp 13.2.0 h807b86a_4 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libiconv 1.17 hd590300_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libidn2 2.3.7 hd590300_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libjemalloc 5.3.0 hcb278e6_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libnghttp2 1.51.0 hdcd2b5c_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libpng 1.6.39 h753d276_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libprotobuf 3.18.0 h780b84a_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
librsvg 2.54.4 h7abd40a_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libsodium 1.0.18 h36c2ea0_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libsqlite 3.44.2 h2797004_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libssh2 1.10.0 haa6b8db_3 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libstdcxx-ng 13.2.0 h7e041cc_4 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libtiff 4.4.0 h82bc61c_5 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libtool 2.4.7 h27087fc_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libunistring 0.9.10 h7f98852_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libuuid 2.38.1 h0b41bf4_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libwebp 1.3.2 h11a3e52_0 anaconda
libwebp-base 1.3.2 hd590300_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libxcb 1.15 h0b41bf4_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libxcrypt 4.4.36 hd590300_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libxml2 2.9.14 h74e7548_0 anaconda
libzlib 1.2.13 hd590300_5 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
llvm-openmp 8.0.1 hc9558a2_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
lzstring 1.0.4 py_1001 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
markdown 3.3.7 pypi_0 pypi
markupsafe 2.0.1 py36h8f6f2f9_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
matplotlib-base 3.1.3 py36hef1b27d_0 anaconda
mccabe 0.6.1 py_1 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
memoized-property 1.0.3 py_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
mhcflurry 2.0.1 pyh864c0ab_0 https://mirrors.bfsu.edu.cn/anaconda/cloud/bioconda
mhcnames 0.4.8 pyh864c0ab_1 https://mirrors.bfsu.edu.cn/anaconda/cloud/bioconda
mhcnuggets 2.4.1 pyh7cba7a3_0 bioconda
mhctools 1.8.1 pypi_0 pypi
mkl 2019.4 243 anaconda
mkl-service 2.3.0 py36h516909a_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
mkl_fft 1.1.0 py36hc1659b7_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
mkl_random 1.1.0 py36hb3f55d8_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
mock 5.1.0 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
msisensor 0.5 hd0b41b6_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
multidict 5.2.0 py36h8f6f2f9_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
multiqc 1.9 py_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
ncbi-vdb 3.0.10 hdbdd923_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
ncurses 6.1 hf484d3e_1002 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
networkx 2.5.1 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
np_utils 0.5.12.1 pyh9f0ad1d_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
numpy 1.19.1 py36hbc911f0_0 anaconda
numpy-base 1.19.1 py36hfa32c7d_0 anaconda
oauthlib 3.2.2 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
openjdk 8.0.382 hd590300_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
openjpeg 2.5.0 h7d73246_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
openmp 8.0.1 0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
openssl 1.1.1w hd590300_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
opt_einsum 3.3.0 pyhc1e730c_2 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
ossuuid 1.6.2 hf484d3e_1000 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pandas 1.0.5 pypi_0 pypi
pango 1.50.7 hbd2fdc8_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
paramiko 2.12.0 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pbzip2 1.1.13 h1fcc475_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pcre 8.45 h9c3ff4c_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pcre2 10.42 hcad00b1_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
perl 5.32.1 7_hd590300_perl5 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
perl-alien-build 2.48 pl5321hec16e2b_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-alien-libxml2 0.17 pl5321hec16e2b_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-archive-tar 2.40 pl5321hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-business-isbn 3.007 pl5321hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-business-isbn-data 20210112.006 pl5321hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-capture-tiny 0.48 pl5321hdfd78af_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-carp 1.38 pl5321hdfd78af_4 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-common-sense 3.75 pl5321hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-compress-raw-bzip2 2.201 pl5321h87f3376_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-compress-raw-zlib 2.105 pl5321h87f3376_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-constant 1.33 pl5321hdfd78af_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-data-dumper 2.183 pl5321hec16e2b_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-db-file 1.855 pl5321h779adbc_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-encode 3.19 pl5321hec16e2b_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-exporter 5.72 pl5321hdfd78af_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-exporter-tiny 1.002002 pl5321hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-extutils-makemaker 7.70 pl5321hd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
perl-ffi-checklib 0.28 pl5321hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-file-chdir 0.1010 pl5321hdfd78af_3 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-file-path 2.18 pl5321hd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
perl-file-temp 0.2304 pl5321hd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
perl-file-util 4.201720 pl5321hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-file-which 1.24 pl5321hd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
perl-importer 0.026 pl5321hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-io-compress 2.201 pl5321hdbdd923_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-io-gzip 0.20 pl5321h7132678_4 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-io-zlib 1.14 pl5321hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-json 4.10 pl5321hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-json-xs 2.34 pl5321h4ac6f70_6 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-lib 0.63 pl5321hdfd78af_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-list-moreutils 0.430 pl5321hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-list-moreutils-xs 0.430 pl5321h031d066_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-mime-base64 3.16 pl5321hec16e2b_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-parent 0.236 pl5321hdfd78af_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-path-tiny 0.122 pl5321hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-pathtools 3.75 pl5321hec16e2b_3 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-scalar-list-utils 1.62 pl5321hec16e2b_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-scope-guard 0.21 pl5321hdfd78af_3 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-set-intervaltree 0.12 pl5321hdbdd923_3 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-sub-info 0.002 pl5321hdfd78af_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-term-table 0.016 pl5321hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-test2-suite 0.000145 pl5321hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-types-serialiser 1.01 pl5321hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-uri 5.12 pl5321hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-xml-libxml 2.0207 pl5321h661654b_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-xml-namespacesupport 1.12 pl5321hdfd78af_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-xml-sax 1.02 pl5321hdfd78af_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-xml-sax-base 1.09 pl5321hdfd78af_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
picard 2.21.4 0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
pigz 2.4 h84994c4_0 anaconda
pip 20.2.2 py36_0 anaconda
pixman 0.38.0 h516909a_1003 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pkg-config 0.29.2 h36c2ea0_1008 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
ply 3.11 py_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
prettytable 2.5.0 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
progressbar33 2.4 py_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
protobuf 3.18.0 py36hc4f0c31_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
psutil 5.8.0 py36h8f6f2f9_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pthread-stubs 0.4 h36c2ea0_1001 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pyasn1 0.5.1 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pyasn1-modules 0.3.0 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pybigwig 0.3.17 py36hc013797_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
pycparser 2.21 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pyensembl 2.1.0 pyh7cba7a3_0 https://mirrors.bfsu.edu.cn/anaconda/cloud/bioconda
pygments 2.14.0 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pygraphviz 1.3.1 py36_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
pyjwt 2.8.0 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
pylint 2.8.3 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
pynacl 1.4.0 py36h8f6f2f9_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pyopenssl 22.0.0 pyhd8ed1ab_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pyparsing 3.1.1 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pyrsistent 0.17.3 py36h8f6f2f9_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pysam 0.8.3 py36h84994c4_6 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
pysftp 0.2.9 py36_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
pysocks 1.7.1 py36h5fab9bb_3 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
python 3.6.10 h0371630_0 anaconda
python-dateutil 2.8.2 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
python-irodsclient 1.1.9 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
python_abi 3.6 2_cp36m https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pytz 2023.3.post1 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pyu2f 0.1.5 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pyvcf3 1.0.3 pyhdfd78af_0 https://mirrors.bfsu.edu.cn/anaconda/cloud/bioconda
pyyaml 5.4.1 py36h8f6f2f9_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
r-base 3.4.3 h9bb98a2_5 defaults
ratelimiter 1.2.0 pyhd8ed1ab_1003 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
readline 7.0 hf8c457e_1001 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
requests 2.27.1 pyhd3eb1b0_0 anaconda
requests-oauthlib 1.3.1 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
rsa 3.1.4 py36_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
s3transfer 0.5.2 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
salmon 0.13.1 h86b0361_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
sambamba 0.6.6 2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
samtools 1.9 h10a08f8_12 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
scikit-learn 0.24.0 py36he4fde30_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
scipy 1.4.1 pypi_0 pypi
sercol 0.1.4 pyh7cba7a3_0 https://mirrors.bfsu.edu.cn/anaconda/cloud/bioconda
serializable 0.2.1 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
setuptools 58.0.4 py36h5fab9bb_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
simplejson 3.8.1 py36_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
six 1.16.0 pyh6c4a22f_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
smmap 3.0.5 pyh44b312d_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
snakemake 5.5.4 2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
snakemake-minimal 5.5.4 py_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
spectra 0.0.11 py_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
sqlite 3.31.1 h7b6447c_0 anaconda
star 2.6.1d 0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
star-fusion 1.5.0 0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
stone 3.3.1 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
tbb 2020.2 h4bd325d_4 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
tensorboard 2.2.2 pypi_0 pypi
tensorboard-data-server 0.6.0 py36hc39840e_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
tensorboard-plugin-wit 1.8.1 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
tensorflow 2.2.0 mkl_py36h5a57954_0 https://mirrors.bfsu.edu.cn/anaconda/pkgs/main
tensorflow-base 2.2.0 mkl_py36hd506778_0 https://mirrors.bfsu.edu.cn/anaconda/pkgs/main
tensorflow-estimator 2.2.0 pypi_0 pypi
termcolor 1.1.0 pyhd8ed1ab_3 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
threadpoolctl 3.1.0 pyh8a188c0_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
tidepy 1.3.6 pypi_0 pypi
tinytimer 0.0.0 py_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
tk 8.6.13 noxft_h4845f30_101 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
tktable 2.10 h0c5db8f_5 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
toml 0.10.2 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
tornado 6.1 py36h8f6f2f9_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
tqdm 4.7.2 py36_0 https://mirrors.bfsu.edu.cn/anaconda/cloud/bioconda
trust4 1.0.5.1 h2e03b76_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
typechecks 0.1.0 py_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
typed-ast 1.4.3 py36h8f6f2f9_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
typing-extensions 4.1.1 hd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
typing_extensions 4.1.1 pyha770c72_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
urllib3 1.26.15 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
varcode 1.1.0 pyh7cba7a3_0 https://mirrors.bfsu.edu.cn/anaconda/cloud/bioconda
wcwidth 0.2.10 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
werkzeug 2.0.2 pyhd8ed1ab_0 https://mirrors.bfsu.edu.cn./anaconda/cloud/conda-forge
wget 1.20.3 ha56f1ee_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
wheel 0.37.1 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
wrapt 1.13.1 py36h8f6f2f9_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-kbproto 1.0.7 h7f98852_1002 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-libice 1.1.1 hd590300_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-libsm 1.2.4 h7391055_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-libx11 1.8.7 h8ee46fc_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-libxau 1.0.11 hd590300_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-libxdmcp 1.1.3 h7f98852_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-libxext 1.3.4 h0b41bf4_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-libxrender 0.9.11 hd590300_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-libxt 1.3.0 hd590300_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-renderproto 0.11.1 h7f98852_1002 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-xextproto 7.3.0 h0b41bf4_1003 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-xproto 7.0.31 h7f98852_1007 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xz 5.2.6 h166bdaf_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
yaml 0.2.5 h7f98852_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
yarl 1.6.3 py36h8f6f2f9_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
zipp 3.6.0 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
zlib 1.2.13 hd590300_5 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
zstd 1.5.5 hfc55251_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pip list
Package Version
----------------------------- ------------
absl-py 1.4.0
aioeasywebdav 2.4.0
aiohttp 3.7.4.post0
appdirs 1.4.4
astor 0.8.1
astroid 2.5.6
astunparse 1.6.3
async-timeout 3.0.1
attrs 22.2.0
backports.functools-lru-cache 2.0.0
bcrypt 3.2.0
biopython 1.76
blinker 1.5
boto3 1.21.32
botocore 1.24.32
brotlipy 0.7.0
cachetools 4.2.4
certifi 2021.5.30
cffi 1.14.6
chardet 4.0.0
charset-normalizer 2.0.12
click 8.0.1
colorama 0.4.5
coloredlogs 15.0.1
colormath 3.0.0
ConfigArgParse 1.7
cryptography 35.0.0
cycler 0.11.0
datacache 1.1.5
dataclasses 0.8
datrie 0.8.2
decorator 4.4.2
defusedxml 0.7.1
docutils 0.17.1
dropbox 11.36.2
filechunkio 1.6
ftputil 3.2
future 0.18.2
gast 0.3.3
gitdb 4.0.10
GitPython 3.1.18
google-api-core 2.8.0
google-auth 1.35.0
google-auth-oauthlib 0.4.6
google-cloud-core 2.3.1
google-cloud-storage 2.10.0
google-crc32c 1.1.2
google-pasta 0.2.0
google-resumable-media 2.3.3
googleapis-common-protos 1.53.0
grpcio 1.38.1
gtfparse 1.2.1
h5py 2.10.0
humanfriendly 10.0
idna 3.6
idna-ssl 1.1.0
importlib-metadata 4.8.1
isort 5.10.1
Jinja2 3.0.3
jmespath 0.10.0
joblib 1.0.1
jsonschema 4.1.2
Keras 2.4.3
Keras-Preprocessing 1.1.2
kiwisolver 1.3.1
lazy-object-proxy 1.6.0
lzstring 1.0.4
Markdown 3.3.7
MarkupSafe 2.0.1
matplotlib 3.1.3
mccabe 0.6.1
memoized-property 1.0.3
mhcflurry 2.0.1
mhcnames 0.4.8
mhcnuggets 2.4.1
mhctools 1.8.1
mkl-fft 1.1.0
mkl-random 1.1.0
mkl-service 2.3.0
mock 5.1.0
multidict 5.2.0
multiqc 1.9
networkx 2.5.1
np-utils 0.5.12.1
numpy 1.19.1
oauthlib 3.2.2
opt-einsum 3.3.0
pandas 1.0.5
paramiko 2.12.0
pip 20.2.2
ply 3.11
prettytable 2.5.0
progressbar33 2.4
protobuf 3.18.0
psutil 5.8.0
pyasn1 0.5.1
pyasn1-modules 0.3.0
pyBigWig 0.3.17
pycparser 2.21
pyensembl 2.1.0
Pygments 2.14.0
pygraphviz 1.3.1
PyJWT 2.8.0
pylint 2.8.3
PyNaCl 1.4.0
pyOpenSSL 22.0.0
pyparsing 3.1.1
pyrsistent 0.17.3
pysam 0.8.3
pysftp 0.2.9
PySocks 1.7.1
python-dateutil 2.8.2
python-irodsclient 1.1.9
pytz 2023.3.post1
pyu2f 0.1.5
PyVCF3 1.0.3
PyYAML 5.4.1
ratelimiter 1.2.0
requests 2.27.1
requests-oauthlib 1.3.1
rsa 3.1.4
s3transfer 0.5.2
scikit-learn 0.24.0
scipy 1.4.1
sercol 0.1.4
serializable 0.2.1
setuptools 58.0.4
simplejson 3.8.1
six 1.16.0
smmap 3.0.5
snakemake 5.5.4
spectra 0.0.11
stone 3.3.1
tensorboard 2.2.2
tensorboard-data-server 0.6.0
tensorboard-plugin-wit 1.8.1
tensorflow 2.2.0
tensorflow-estimator 2.2.0
termcolor 1.1.0
threadpoolctl 3.1.0
tidepy 1.3.6
tinytimer 0.0.0
toml 0.10.2
tornado 6.1
tqdm 4.7.2
typechecks 0.1.0
typed-ast 1.4.3
typing-extensions 4.1.1
urllib3 1.26.15
varcode 1.1.0
wcwidth 0.2.10
Werkzeug 2.0.2
wheel 0.37.1
wrapt 1.13.1
yarl 1.6.3
zipp 3.6.0
By the way, this environment is very complex. I wonder if the author is willing to develop a docker version? @Lindky
stat_perl_r works for me, here are the environment info. Anyway, the docker version of RIMA is helpful.
# packages in environment at /home/sutai/miniconda3/envs/stat_perl_r:
#
# Name Version Build Channel
_libgcc_mutex 0.1 main defaults
_openmp_mutex 5.1 1_gnu defaults
_r-mutex 1.0.0 anacondar_1 r
binutils_impl_linux-64 2.33.1 he6710b0_7 defaults
binutils_linux-64 2.33.1 h9595d00_15 defaults
bioconductor-annotate 1.64.0 r36_0 bioconda
bioconductor-annotationdbi 1.48.0 r36_0 bioconda
bioconductor-annotationfilter 1.10.0 r36_0 bioconda
bioconductor-biobase 2.46.0 r36h516909a_0 bioconda
bioconductor-biocfilecache 1.10.0 r36_0 bioconda
bioconductor-biocgenerics 0.32.0 r36_0 bioconda
bioconductor-biocparallel 1.20.0 r36he1b5a44_0 bioconda
bioconductor-biocstyle 2.14.0 r36_0 bioconda
bioconductor-biomart 2.42.0 r36_0 bioconda
bioconductor-biostrings 2.54.0 r36h516909a_0 bioconda
bioconductor-biovizbase 1.34.0 r36h516909a_0 bioconda
bioconductor-bsgenome 1.54.0 r36_0 bioconda
bioconductor-chimeraviz 1.12.0 r36_0 bioconda
bioconductor-clusterprofiler 3.14.0 r36_0 bioconda
bioconductor-complexheatmap 2.2.0 r36_0 bioconda
bioconductor-delayedarray 0.12.0 r36h516909a_0 bioconda
bioconductor-deseq2 1.26.0 r36he1b5a44_0 bioconda
bioconductor-do.db 2.9 r36_7 bioconda
bioconductor-dose 3.12.0 r36_0 bioconda
bioconductor-enrichplot 1.6.0 r36_0 bioconda
bioconductor-ensembldb 2.10.0 r36_0 bioconda
bioconductor-fgsea 1.12.0 r36he1b5a44_0 bioconda
bioconductor-genefilter 1.68.0 r36hc99cbb1_0 bioconda
bioconductor-geneplotter 1.64.0 r36_0 bioconda
bioconductor-genomeinfodb 1.22.0 r36_0 bioconda
bioconductor-genomeinfodbdata 1.2.2 r36_0 bioconda
bioconductor-genomicalignments 1.22.0 r36h516909a_0 bioconda
bioconductor-genomicfeatures 1.38.0 r36_0 bioconda
bioconductor-genomicranges 1.38.0 r36h516909a_0 bioconda
bioconductor-ggtree 2.0.0 r36_0 bioconda
bioconductor-go.db 3.10.0 r36_0 bioconda
bioconductor-gosemsim 2.12.0 r36he1b5a44_0 bioconda
bioconductor-graph 1.64.0 r36h516909a_0 bioconda
bioconductor-gseabase 1.48.0 r36_0 bioconda
bioconductor-gsva 1.34.0 r36h516909a_0 bioconda
bioconductor-gviz 1.30.0 r36_0 bioconda
bioconductor-impute 1.60.0 r36h6e990d7_0 bioconda
bioconductor-iranges 2.20.0 r36h516909a_0 bioconda
bioconductor-limma 3.42.0 r36h516909a_0 bioconda
bioconductor-maftools 2.2.0 r36_0 bioconda
bioconductor-msa 1.18.0 r36he1b5a44_0 bioconda
bioconductor-org.hs.eg.db 3.10.0 r36_0 bioconda
bioconductor-org.mm.eg.db 3.10.0 r36_0 bioconda
bioconductor-preprocesscore 1.48.0 r36h516909a_0 bioconda
bioconductor-protgenerics 1.18.0 r36_0 bioconda
bioconductor-qvalue 2.18.0 r36_1 bioconda
bioconductor-rgraphviz 2.30.0 r36he1b5a44_0 bioconda
bioconductor-rhtslib 1.18.0 r36hdb70ac9_1 bioconda
bioconductor-rsamtools 2.2.0 r36he1b5a44_0 bioconda
bioconductor-rtracklayer 1.46.0 r36h516909a_0 bioconda
bioconductor-s4vectors 0.24.0 r36h516909a_0 bioconda
bioconductor-summarizedexperiment 1.16.0 r36_0 bioconda
bioconductor-sva 3.34.0 r36h516909a_0 bioconda
bioconductor-treeio 1.10.0 r36_0 bioconda
bioconductor-tximport 1.14.0 r36_0 bioconda
bioconductor-variantannotation 1.32.0 r36h516909a_0 bioconda
bioconductor-xvector 0.26.0 r36h516909a_0 bioconda
bioconductor-zlibbioc 1.32.0 r36h516909a_0 bioconda
bowtie2 2.4.2 py39hc9c6fcd_2 bioconda
bwidget 1.9.16 h9eba36c_0 defaults
bzip2 1.0.8 h5eee18b_6 defaults
ca-certificates 2024.3.11 h06a4308_0 defaults
cairo 1.16.0 hb05425b_5 defaults
curl 7.69.1 hbc83047_0 defaults
expat 2.6.2 h6a678d5_0 defaults
fontconfig 2.14.1 h52c9d5c_1 defaults
freetype 2.12.1 h4a9f257_0 defaults
fribidi 1.0.10 h7b6447c_0 defaults
gcc_impl_linux-64 7.3.0 habb00fd_1 defaults
gcc_linux-64 7.3.0 h553295d_15 defaults
gdbm 1.18 hd4cb3f1_4 defaults
gfortran_impl_linux-64 7.3.0 hdf63c60_1 defaults
gfortran_linux-64 7.3.0 h553295d_15 defaults
glib 2.78.4 h6a678d5_0 defaults
glib-tools 2.78.4 h6a678d5_0 defaults
graphite2 1.3.14 h295c915_1 defaults
gsl 2.4 h14c3975_4 defaults
gxx_impl_linux-64 7.3.0 hdf63c60_1 defaults
gxx_linux-64 7.3.0 h553295d_15 defaults
harfbuzz 4.3.0 hf52aaf7_1 defaults
icu 58.2 he6710b0_3 defaults
jpeg 9e h5eee18b_1 defaults
krb5 1.17.1 h173b8e3_0 defaults
ld_impl_linux-64 2.33.1 h53a641e_7 defaults
lerc 3.0 h295c915_0 defaults
libblas 3.9.0 13_linux64_openblas conda-forge
libcurl 7.69.1 h20c2e04_0 defaults
libdeflate 1.17 h5eee18b_1 defaults
libedit 3.1.20230828 h5eee18b_0 defaults
libffi 3.4.4 h6a678d5_1 defaults
libgcc-ng 11.2.0 h1234567_1 defaults
libgfortran-ng 7.5.0 ha8ba4b0_17 defaults
libgfortran4 7.5.0 ha8ba4b0_17 defaults
libglib 2.78.4 hdc74915_0 defaults
libgomp 11.2.0 h1234567_1 defaults
libiconv 1.16 h5eee18b_3 defaults
liblapack 3.9.0 13_linux64_openblas conda-forge
libopenblas 0.3.18 hf726d26_0 defaults
libpng 1.6.39 h5eee18b_0 defaults
libssh2 1.10.0 h37d81fd_2 defaults
libstdcxx-ng 11.2.0 h1234567_1 defaults
libtiff 4.5.1 h6a678d5_0 defaults
libuuid 1.41.5 h5eee18b_0 defaults
libwebp-base 1.3.2 h5eee18b_0 defaults
libxcb 1.15 h7f8727e_0 defaults
libxml2 2.9.14 h74e7548_0 defaults
lz4-c 1.9.4 h6a678d5_1 defaults
make 4.2.1 h1bed415_1 defaults
ncurses 6.4 h6a678d5_0 defaults
openssl 1.1.1w h7f8727e_0 defaults
pango 1.50.7 h05da053_0 defaults
pcre 8.45 h295c915_0 defaults
pcre2 10.42 hebb0a14_1 defaults
perl 5.34.0 h5eee18b_2 defaults
pip 24.0 py39h06a4308_0 defaults
pixman 0.40.0 h7f8727e_1 defaults
python 3.9.16 h7a1cb2a_2 defaults
python_abi 3.9 2_cp39 conda-forge
r 3.6.0 r36_0 r
r-acepack 1.4.1 r36ha65eedd_0 r
r-ade4 1.7_13 r36h96ca727_0 r
r-ape 5.3 r36h29659fb_0 r
r-argumentcheck 0.10.2 r36h6115d3f_0 r
r-askpass 1.0 r36h14c3975_0 r
r-assertthat 0.2.1 r36h6115d3f_0 r
r-backports 1.1.4 r36h96ca727_0 r
r-base 3.6.1 haffb61f_2 r
r-base64enc 0.1_3 r36h96ca727_4 r
r-beeswarm 0.2.3 r36h6115d3f_0 r
r-bh 1.69.0_1 r36h6115d3f_0 r
r-biocmanager 1.30.4 r36h6115d3f_0 r
r-bit 1.1_14 r36h96ca727_0 r
r-bit64 0.9_7 r36h96ca727_0 r
r-bitops 1.0_6 r36h96ca727_4 r
r-blob 1.1.1 r36h6115d3f_0 r
r-bookdown 0.13 r36h6115d3f_0 r
r-boot 1.3_20 r36h6115d3f_0 r
r-brew 1.0_6 r36h6115d3f_4 r
r-broom 0.5.2 r36h6115d3f_0 r
r-callr 3.2.0 r36h6115d3f_0 r
r-cellranger 1.1.0 r36h6115d3f_0 r
r-checkmate 1.9.1 r36h96ca727_0 r
r-circlize 0.4.12 r36hc72bb7e_0 conda-forge
r-class 7.3_15 r36h96ca727_0 r
r-cli 1.1.0 r36h6115d3f_0 r
r-clipr 0.6.0 r36h6115d3f_0 r
r-clue 0.3_57 r36h96ca727_0 r
r-cluster 2.0.8 r36ha65eedd_0 r
r-coda 0.19_2 r36h6115d3f_0 r
r-codetools 0.2_16 r36h6115d3f_0 r
r-colorspace 1.4_1 r36h96ca727_0 r
r-commonmark 1.7 r36h96ca727_0 r
r-corrplot 0.84 r36h6115d3f_0 r
r-cowplot 1.1.1 r36hc72bb7e_0 conda-forge
r-crayon 1.3.4 r36h6115d3f_0 r
r-crosstalk 1.0.0 r36h6115d3f_0 r
r-curl 3.3 r36h96ca727_0 r
r-data.table 1.12.2 r36h96ca727_0 r
r-data.tree 1.0.0 r36_0 conda-forge
r-dbi 1.0.0 r36h6115d3f_0 r
r-dbplyr 1.4.0 r36h6115d3f_0 r
r-dendextend 1.15.1 r36hc72bb7e_0 conda-forge
r-deoptimr 1.0_8 r36h6115d3f_0 r
r-desc 1.2.0 r36h6115d3f_0 r
r-diagrammer 1.0.1 r36h6115d3f_0 r
r-dichromat 2.0_0 r36h6115d3f_4 r
r-digest 0.6.18 r36h96ca727_0 r
r-doparallel 1.0.14 r36h6115d3f_0 r
r-downloader 0.4 r36h6115d3f_0 r
r-dplyr 0.8.0.1 r36h29659fb_0 r
r-dt 0.5 r36h6115d3f_0 r
r-dynamictreecut 1.63_1 r36h6115d3f_0 r
r-e1071 1.7_1 r36h29659fb_0 r
r-ellipsis 0.1.0 r36h96ca727_0 r
r-epic 1.1 r36_1 bioconda
r-europepmc 0.4 r36h6115d3f_0 conda-forge
r-evaluate 0.13 r36h6115d3f_0 r
r-fansi 0.4.0 r36h96ca727_0 r
r-farver 2.1.0 r36h03ef668_0 conda-forge
r-fastcluster 1.1.25 r36h29659fb_0 r
r-fastmatch 1.1_0 r36h96ca727_0 r
r-fit.models 0.5_14 r36h6115d3f_0 r
r-forcats 0.4.0 r36h6115d3f_0 r
r-foreach 1.4.4 r36h6115d3f_0 r
r-foreign 0.8_71 r36h96ca727_0 r
r-formatr 1.6 r36h6115d3f_0 r
r-formula 1.2_3 r36h6115d3f_0 r
r-fs 1.2.7 r36h29659fb_0 r
r-futile.logger 1.4.3 r36h6115d3f_1003 conda-forge
r-futile.options 1.0.1 r36h6115d3f_0 r
r-generics 0.0.2 r36h6115d3f_0 r
r-getopt 1.20.3 r36h6115d3f_0 r
r-getoptlong 1.0.5 r36hc72bb7e_0 conda-forge
r-ggally 2.0.0 r36h142f84f_1 conda-forge
r-ggcorrplot 0.1.3 r36h6115d3f_2 conda-forge
r-ggforce 0.3.3 r36h03ef668_0 conda-forge
r-ggfortify 0.4.11 r36h142f84f_0 conda-forge
r-ggnewscale 0.4.5 r36hc72bb7e_0 conda-forge
r-ggplot2 3.3.3 r36hc72bb7e_0 conda-forge
r-ggplotify 0.0.7 r36hc72bb7e_0 conda-forge
r-ggpubr 0.2.5 r36h6115d3f_1 conda-forge
r-ggraph 2.0.5 r36h03ef668_0 conda-forge
r-ggrepel 0.9.1 r36h03ef668_0 conda-forge
r-ggridges 0.5.3 r36hc72bb7e_0 conda-forge
r-ggsci 2.9 r36h6115d3f_1003 conda-forge
r-ggsignif 0.6.1 r36hc72bb7e_0 conda-forge
r-globaloptions 0.1.0 r36h6115d3f_0 r
r-glue 1.3.1 r36h96ca727_0 r
r-graphlayouts 0.7.1 r36h1b71b39_0 conda-forge
r-gridextra 2.3 r36h6115d3f_0 r
r-gridgraphics 0.4_1 r36h6115d3f_0 r
r-gtable 0.3.0 r36h6115d3f_0 r
r-gtools 3.8.1 r36h96ca727_0 r
r-haven 2.1.0 r36h29659fb_0 r
r-highr 0.8 r36h6115d3f_0 r
r-hmisc 4.2_0 r36ha65eedd_0 r
r-hms 0.4.2 r36h6115d3f_0 r
r-htmltable 1.13.1 r36h6115d3f_0 r
r-htmltools 0.3.6 r36h29659fb_0 r
r-htmlwidgets 1.3 r36h6115d3f_0 r
r-httpuv 1.5.1 r36h29659fb_0 r
r-httr 1.4.0 r36h6115d3f_0 r
r-igraph 1.2.4.1 r36h80f5a37_0 r
r-immunedeconv 2.0.2 r36_0 bioconda
r-influencer 0.1.0 r36h96ca727_0 r
r-isoband 0.2.0 r36h29659fb_0 r
r-iterators 1.0.10 r36h6115d3f_0 r
r-jsonlite 1.6 r36h96ca727_0 r
r-kernsmooth 2.23_15 r36ha65eedd_4 r
r-knitr 1.22 r36h6115d3f_0 r
r-labeling 0.3 r36h6115d3f_4 r
r-lambda.r 1.2.3 r36h6115d3f_0 r
r-later 0.8.0 r36h29659fb_0 r
r-lattice 0.20_38 r36h96ca727_0 r
r-latticeextra 0.6_28 r36h6115d3f_0 r
r-lazyeval 0.2.2 r36h96ca727_0 r
r-lifecycle 1.0.0 r36hc72bb7e_0 conda-forge
r-limsolve 1.5.6 r36h31ca83e_2 conda-forge
r-locfit 1.5_9.4 r36hcdcec82_1 conda-forge
r-lpsolve 5.6.13 r36h96ca727_0 r
r-lubridate 1.7.4 r36h29659fb_0 r
r-magrittr 1.5 r36h6115d3f_4 r
r-markdown 0.9 r36h96ca727_0 r
r-mass 7.3_51.3 r36h96ca727_0 r
r-matrix 1.2_17 r36h96ca727_0 r
r-matrixstats 0.54.0 r36h96ca727_0 r
r-mcpcounter 1.1.0 r36_0 bioconda
r-memoise 1.1.0 r36h6115d3f_0 r
r-mgcv 1.8_28 r36h96ca727_0 r
r-mime 0.6 r36h96ca727_0 r
r-modelr 0.1.4 r36h6115d3f_0 r
r-munsell 0.5.0 r36h6115d3f_0 r
r-mvtnorm 1.0_10 r36ha65eedd_0 r
r-network 1.16.0 r36hcdcec82_1 conda-forge
r-nlme 3.1_139 r36ha65eedd_0 r
r-nnet 7.3_12 r36h96ca727_0 r
r-openssl 1.3 r36h96ca727_0 r
r-optparse 1.6.2 r36h6115d3f_0 r
r-pcapp 1.9_73 r36h29659fb_0 r
r-permute 0.9_5 r36h6115d3f_0 r
r-pheatmap 1.0.12 r36h6115d3f_0 r
r-pillar 1.3.1 r36h6115d3f_0 r
r-pkgbuild 1.0.3 r36h6115d3f_0 r
r-pkgconfig 2.0.2 r36h6115d3f_0 r
r-pkgload 1.0.2 r36h29659fb_0 r
r-plogr 0.2.0 r36h6115d3f_0 r
r-plyr 1.8.4 r36h29659fb_0 r
r-png 0.1_7 r36h96ca727_0 r
r-polyclip 1.10_0 r36h29659fb_0 r
r-polynom 1.4_0 r36h6115d3f_0 r
r-pracma 2.2.5 r36h6115d3f_0 r
r-praise 1.0.0 r36h6115d3f_4 r
r-prettyunits 1.0.2 r36h6115d3f_0 r
r-processx 3.3.0 r36h96ca727_0 r
r-progress 1.2.0 r36h6115d3f_0 r
r-promises 1.0.1 r36h29659fb_0 r
r-ps 1.3.0 r36h96ca727_0 r
r-purrr 0.3.2 r36h96ca727_0 r
r-quadprog 1.5_5 r36ha65eedd_4 r
r-r.methodss3 1.7.1 r36h6115d3f_0 r
r-r.oo 1.22.0 r36h6115d3f_0 r
r-r.utils 2.8.0 r36h6115d3f_0 r
r-r6 2.4.0 r36h6115d3f_0 r
r-rappdirs 0.3.1 r36h96ca727_0 r
r-rcircos 1.2.1 r36h6115d3f_0 r
r-rcolorbrewer 1.1_2 r36h6115d3f_0 r
r-rcpp 1.0.1 r36h29659fb_0 r
r-rcpparmadillo 0.9.300.2.0 r36h29659fb_0 r
r-rcppeigen 0.3.3.5.0 r36h29659fb_0 r
r-rcurl 1.95_4.12 r36h96ca727_0 r
r-readr 1.3.1 r36h29659fb_0 r
r-readxl 1.3.1 r36h29659fb_0 r
r-recommended 3.6.0 r36_0 r
r-rematch 1.0.1 r36h6115d3f_0 r
r-reprex 0.2.1 r36h6115d3f_0 r
r-reshape 0.8.8 r36h6115d3f_0 r
r-reshape2 1.4.3 r36h29659fb_0 r
r-rgexf 0.15.3 r36h96ca727_0 r
r-rjson 0.2.20 r36h29659fb_0 r
r-rlang 0.4.11 r36hcfec24a_0 conda-forge
r-rle 0.9.2 r36h0eb13af_0 conda-forge
r-rmarkdown 1.12 r36h6115d3f_0 r
r-robust 0.5_0.0 r36hc3f0d1c_2 conda-forge
r-robustbase 0.93_4 r36ha65eedd_0 r
r-rook 1.1_1 r36h96ca727_0 r
r-roxygen2 6.1.1 r36h29659fb_0 r
r-rpart 4.1_15 r36h96ca727_0 r
r-rprojroot 1.3_2 r36h6115d3f_0 r
r-rrcov 1.5_5 r36hed91ed1_1 conda-forge
r-rsqlite 2.1.1 r36h29659fb_0 r
r-rstudioapi 0.10 r36h6115d3f_0 r
r-rvcheck 0.1.3 r36h6115d3f_0 r
r-rvest 0.3.3 r36h6115d3f_0 r
r-scales 1.1.1 r36h6115d3f_0 conda-forge
r-segmented 1.0_0 r36h6115d3f_0 r
r-selectr 0.4_1 r36h6115d3f_0 r
r-seqinr 4.2_5 r36hcfec24a_0 conda-forge
r-shape 1.4.4 r36h6115d3f_0 r
r-shiny 1.3.2 r36h6115d3f_0 r
r-shinythemes 1.1.2 r36h6115d3f_0 r
r-sna 2.5 r36hcdcec82_1 conda-forge
r-snow 0.4_3 r36h6115d3f_0 r
r-sourcetools 0.1.7 r36h29659fb_0 r
r-spatial 7.3_11 r36h96ca727_4 r
r-statnet.common 4.4.1 r36h0eb13af_0 conda-forge
r-stringi 1.4.3 r36h29659fb_0 r
r-stringr 1.4.0 r36h6115d3f_0 r
r-survival 2.44_1.1 r36h96ca727_0 r
r-sys 3.2 r36h96ca727_0 r
r-testit 0.9 r36h6115d3f_0 r
r-testthat 2.1.1 r36h29659fb_0 r
r-tibble 2.1.1 r36h96ca727_0 r
r-tidygraph 1.2.0 r36h0357c0b_0 conda-forge
r-tidyr 0.8.3 r36h29659fb_0 r
r-tidyselect 0.2.5 r36h29659fb_0 r
r-tidytree 0.3.4 r36hc72bb7e_0 conda-forge
r-tidyverse 1.2.1 r36h6115d3f_0 r
r-tinytex 0.12 r36h6115d3f_0 r
r-triebeard 0.3.0 r36h29659fb_0 r
r-tweenr 1.0.2 r36h03ef668_0 conda-forge
r-urltools 1.7.3 r36h0357c0b_2 conda-forge
r-utf8 1.1.4 r36h96ca727_0 r
r-vegan 2.5_6 r36hc3f0d1c_3 conda-forge
r-viridis 0.5.1 r36h6115d3f_0 r
r-viridislite 0.3.0 r36h6115d3f_0 r
r-visnetwork 2.0.6 r36h6115d3f_0 r
r-wgcna 1.69 r36h0357c0b_0 bioconda
r-whisker 0.3_2 r36h6115d3f_4 r
r-withr 2.1.2 r36h6115d3f_0 r
r-wordcloud 2.6 r36h29659fb_0 r
r-xcell 1.2 r36hc9558a2_2 bioconda
r-xfun 0.6 r36h6115d3f_0 r
r-xml 3.98_1.19 r36h96ca727_0 r
r-xml2 1.2.0 r36h29659fb_0 r
r-xtable 1.8_4 r36h6115d3f_0 r
r-yaml 2.2.0 r36h96ca727_0 r
readline 8.2 h5eee18b_0 defaults
setuptools 69.5.1 py39h06a4308_0 defaults
sqlite 3.45.3 h5eee18b_0 defaults
tbb 2020.3 hfd86e86_0 defaults
tk 8.6.14 h39e8969_0 defaults
tktable 2.10 h3d55465_1 defaults
tzdata 2024a h04d1e81_0 defaults
wheel 0.43.0 py39h06a4308_0 defaults
xz 5.2.10 h5eee18b_1 defaults
zlib 1.2.13 h5eee18b_1 defaults
zstd 1.5.5 hc292b87_0 defaults
Hi,
I tried to install RIMA environment. However, I found out that I could not install two python module (mhcnuggets==2.3.3, mhctools==1.8.1). Other necessary module and packages were installed successfully and their versions were matched with rnaseq.yml . When I installed mhctools==1.8.1, an error occured as followings:
When I installed mhcnuggets==2.3.3, an error occured as followings:
I would be appreciated if you can assit with this issue.