dataset process in construction.ipynb

liuqidong07 / LEADER-pytorch

[arXiv'24] The official implementation code of LEADER.

https://arxiv.org/abs/2402.02803

MIT License

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dataset process in construction.ipynb #3

Closed chensaics closed 6 months ago

chensaics commented 6 months ago

Hi Liu, Nice work. May I know how you got these files : ./auxiliary/RXCUI2atc4.csv ./auxiliary/drug-atc.csv ./auxiliary/ndc2RXCUI.txt ./auxiliary/drugbank_drugs_info.csv ./auxiliary/drug-DDI.csv

liuqidong07 commented 6 months ago

Hello, Thanks for your interest in our work. These files can be obtained from the SafeDrug repo (https://github.com/sjy1203/GAMENet/tree/master/data). Thanks for your reminder. I will update this information to README.

Best regards, Qidong

chensaics commented 6 months ago

Thank you for your guide. The drugbank_drugs_info.csv is lost in that project. Is it from the drugbank website (drugbank)?

liuqidong07 commented 6 months ago

Hello, I obtain this file from this link (https://drive.google.com/file/d/1EzIlVeiIR6LFtrBnhzAth4fJt6H_ljxk/view). You can refer to the repo of SafeDrug (https://github.com/ycq091044/SafeDrug) for more related information.

Best regards, Qidong

chensaics commented 6 months ago

Thank you so much