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liyu95 / Disease_gene_prioritization_GCN

PGCN: Disease gene prioritization by disease and gene embedding through GCN
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Failed to install pandas==0.18.0 in python 3.6.7 #21

Open yyou1996 opened 3 years ago

yyou1996 commented 3 years ago

Hi Yu,

Thanks for your excellent work. I met some issue while config the environment. Please see belows:

  1. I failed to install pandas==0.18.0 in python 3.6.7, which output:

    Collecting pandas==0.18.0
Using cached pandas-0.18.0.tar.gz (7.1 MB)
Requirement already satisfied: python-dateutil>=2 in /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages (from pandas==0.18.0) (2.8.1)
Requirement already satisfied: pytz>=2011k in /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages (from pandas==0.18.0) (2020.4)
Requirement already satisfied: numpy>=1.7.0 in /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages (from pandas==0.18.0) (1.19.4)
Requirement already satisfied: six>=1.5 in /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages (from python-dateutil>=2->pandas==0.18.0) (1.15.0)
Building wheels for collected packages: pandas
Building wheel for pandas (setup.py): started
Building wheel for pandas (setup.py): still running...
Building wheel for pandas (setup.py): still running...
Building wheel for pandas (setup.py): finished with status 'error'
ERROR: Command errored out with exit status 1:
command: /home/tlc/anaconda3/envs/pgcn/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-4d95ztpw/pandas_a5792867e4ed4883b0f33e7d6f6bd343/setup.py'"'"'; __file__='"'"'/tmp/pip-install-4d95ztpw/pandas_a5792867e4ed4883b0f33e7d6f6bd343/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-lgrq19ra
   cwd: /tmp/pip-install-4d95ztpw/pandas_a5792867e4ed4883b0f33e7d6f6bd343/
Complete output (1341 lines):
running bdist_wheel
running build
running build_py
creating build
creating build/lib.linux-x86_64-3.6
creating build/lib.linux-x86_64-3.6/pandas
copying pandas/_version.py -> build/lib.linux-x86_64-3.6/pandas
copying pandas/info.py -> build/lib.linux-x86_64-3.6/pandas
copying pandas/__init__.py -> build/lib.linux-x86_64-3.6/pandas
creating build/lib.linux-x86_64-3.6/pandas/compat
copying pandas/compat/numpy_compat.py -> build/lib.linux-x86_64-3.6/pandas/compat
copying pandas/compat/pickle_compat.py -> build/lib.linux-x86_64-3.6/pandas/compat
copying pandas/compat/openpyxl_compat.py -> build/lib.linux-x86_64-3.6/pandas/compat
copying pandas/compat/chainmap.py -> build/lib.linux-x86_64-3.6/pandas/compat
copying pandas/compat/chainmap_impl.py -> build/lib.linux-x86_64-3.6/pandas/compat
copying pandas/compat/__init__.py -> build/lib.linux-x86_64-3.6/pandas/compat
creating build/lib.linux-x86_64-3.6/pandas/computation
copying pandas/computation/expressions.py -> build/lib.linux-x86_64-3.6/pandas/computation
copying pandas/computation/engines.py -> build/lib.linux-x86_64-3.6/pandas/computation
copying pandas/computation/eval.py -> build/lib.linux-x86_64-3.6/pandas/computation
copying pandas/computation/ops.py -> build/lib.linux-x86_64-3.6/pandas/computation
copying pandas/computation/scope.py -> build/lib.linux-x86_64-3.6/pandas/computation
copying pandas/computation/align.py -> build/lib.linux-x86_64-3.6/pandas/computation
copying pandas/computation/common.py -> build/lib.linux-x86_64-3.6/pandas/computation
copying pandas/computation/expr.py -> build/lib.linux-x86_64-3.6/pandas/computation
copying pandas/computation/pytables.py -> build/lib.linux-x86_64-3.6/pandas/computation
copying pandas/computation/api.py -> build/lib.linux-x86_64-3.6/pandas/computation
copying pandas/computation/__init__.py -> build/lib.linux-x86_64-3.6/pandas/computation
creating build/lib.linux-x86_64-3.6/pandas/computation/tests
copying pandas/computation/tests/test_eval.py -> build/lib.linux-x86_64-3.6/pandas/computation/tests
copying pandas/computation/tests/__init__.py -> build/lib.linux-x86_64-3.6/pandas/computation/tests
copying pandas/computation/tests/test_compat.py -> build/lib.linux-x86_64-3.6/pandas/computation/tests
creating build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/groupby.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/panel.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/convert.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/reshape.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/ops.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/base.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/frame.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/categorical.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/algorithms.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/panelnd.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/generic.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/format.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/strings.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/datetools.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/window.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/common.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/series.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/indexing.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/config.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/nanops.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/internals.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/missing.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/api.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/__init__.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/index.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/config_init.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/sparse.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/panel4d.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/style.py -> build/lib.linux-x86_64-3.6/pandas/core
copying pandas/core/dtypes.py -> build/lib.linux-x86_64-3.6/pandas/core
creating build/lib.linux-x86_64-3.6/pandas/indexes
copying pandas/indexes/base.py -> build/lib.linux-x86_64-3.6/pandas/indexes
copying pandas/indexes/range.py -> build/lib.linux-x86_64-3.6/pandas/indexes
copying pandas/indexes/numeric.py -> build/lib.linux-x86_64-3.6/pandas/indexes
copying pandas/indexes/category.py -> build/lib.linux-x86_64-3.6/pandas/indexes
copying pandas/indexes/api.py -> build/lib.linux-x86_64-3.6/pandas/indexes
copying pandas/indexes/__init__.py -> build/lib.linux-x86_64-3.6/pandas/indexes
copying pandas/indexes/multi.py -> build/lib.linux-x86_64-3.6/pandas/indexes
creating build/lib.linux-x86_64-3.6/pandas/io
copying pandas/io/auth.py -> build/lib.linux-x86_64-3.6/pandas/io
copying pandas/io/ga.py -> build/lib.linux-x86_64-3.6/pandas/io
copying pandas/io/pickle.py -> build/lib.linux-x86_64-3.6/pandas/io
copying pandas/io/gbq.py -> build/lib.linux-x86_64-3.6/pandas/io
copying pandas/io/packers.py -> build/lib.linux-x86_64-3.6/pandas/io
copying pandas/io/common.py -> build/lib.linux-x86_64-3.6/pandas/io
copying pandas/io/stata.py -> build/lib.linux-x86_64-3.6/pandas/io
copying pandas/io/data.py -> build/lib.linux-x86_64-3.6/pandas/io
copying pandas/io/sql.py -> build/lib.linux-x86_64-3.6/pandas/io
copying pandas/io/pytables.py -> build/lib.linux-x86_64-3.6/pandas/io
copying pandas/io/parsers.py -> build/lib.linux-x86_64-3.6/pandas/io
copying pandas/io/api.py -> build/lib.linux-x86_64-3.6/pandas/io
copying pandas/io/__init__.py -> build/lib.linux-x86_64-3.6/pandas/io
copying pandas/io/html.py -> build/lib.linux-x86_64-3.6/pandas/io
copying pandas/io/date_converters.py -> build/lib.linux-x86_64-3.6/pandas/io
copying pandas/io/json.py -> build/lib.linux-x86_64-3.6/pandas/io
copying pandas/io/clipboard.py -> build/lib.linux-x86_64-3.6/pandas/io
copying pandas/io/excel.py -> build/lib.linux-x86_64-3.6/pandas/io
copying pandas/io/wb.py -> build/lib.linux-x86_64-3.6/pandas/io
creating build/lib.linux-x86_64-3.6/pandas/io/sas
copying pandas/io/sas/sas_xport.py -> build/lib.linux-x86_64-3.6/pandas/io/sas
copying pandas/io/sas/sas7bdat.py -> build/lib.linux-x86_64-3.6/pandas/io/sas
copying pandas/io/sas/sasreader.py -> build/lib.linux-x86_64-3.6/pandas/io/sas
copying pandas/io/sas/__init__.py -> build/lib.linux-x86_64-3.6/pandas/io/sas
creating build/lib.linux-x86_64-3.6/pandas/rpy
copying pandas/rpy/base.py -> build/lib.linux-x86_64-3.6/pandas/rpy
copying pandas/rpy/vars.py -> build/lib.linux-x86_64-3.6/pandas/rpy
copying pandas/rpy/common.py -> build/lib.linux-x86_64-3.6/pandas/rpy
copying pandas/rpy/mass.py -> build/lib.linux-x86_64-3.6/pandas/rpy
copying pandas/rpy/__init__.py -> build/lib.linux-x86_64-3.6/pandas/rpy
creating build/lib.linux-x86_64-3.6/pandas/sandbox
copying pandas/sandbox/qtpandas.py -> build/lib.linux-x86_64-3.6/pandas/sandbox
copying pandas/sandbox/__init__.py -> build/lib.linux-x86_64-3.6/pandas/sandbox
creating build/lib.linux-x86_64-3.6/pandas/sparse
copying pandas/sparse/panel.py -> build/lib.linux-x86_64-3.6/pandas/sparse
copying pandas/sparse/array.py -> build/lib.linux-x86_64-3.6/pandas/sparse
copying pandas/sparse/frame.py -> build/lib.linux-x86_64-3.6/pandas/sparse
copying pandas/sparse/series.py -> build/lib.linux-x86_64-3.6/pandas/sparse
copying pandas/sparse/scipy_sparse.py -> build/lib.linux-x86_64-3.6/pandas/sparse
copying pandas/sparse/api.py -> build/lib.linux-x86_64-3.6/pandas/sparse
copying pandas/sparse/__init__.py -> build/lib.linux-x86_64-3.6/pandas/sparse
copying pandas/sparse/list.py -> build/lib.linux-x86_64-3.6/pandas/sparse
creating build/lib.linux-x86_64-3.6/pandas/sparse/tests
copying pandas/sparse/tests/test_sparse.py -> build/lib.linux-x86_64-3.6/pandas/sparse/tests
copying pandas/sparse/tests/test_list.py -> build/lib.linux-x86_64-3.6/pandas/sparse/tests
copying pandas/sparse/tests/test_array.py -> build/lib.linux-x86_64-3.6/pandas/sparse/tests
copying pandas/sparse/tests/__init__.py -> build/lib.linux-x86_64-3.6/pandas/sparse/tests
copying pandas/sparse/tests/test_libsparse.py -> build/lib.linux-x86_64-3.6/pandas/sparse/tests
creating build/lib.linux-x86_64-3.6/pandas/stats
copying pandas/stats/ols.py -> build/lib.linux-x86_64-3.6/pandas/stats
copying pandas/stats/moments.py -> build/lib.linux-x86_64-3.6/pandas/stats
copying pandas/stats/var.py -> build/lib.linux-x86_64-3.6/pandas/stats
copying pandas/stats/plm.py -> build/lib.linux-x86_64-3.6/pandas/stats
copying pandas/stats/misc.py -> build/lib.linux-x86_64-3.6/pandas/stats
copying pandas/stats/common.py -> build/lib.linux-x86_64-3.6/pandas/stats
copying pandas/stats/interface.py -> build/lib.linux-x86_64-3.6/pandas/stats
copying pandas/stats/api.py -> build/lib.linux-x86_64-3.6/pandas/stats
copying pandas/stats/__init__.py -> build/lib.linux-x86_64-3.6/pandas/stats
copying pandas/stats/fama_macbeth.py -> build/lib.linux-x86_64-3.6/pandas/stats
copying pandas/stats/math.py -> build/lib.linux-x86_64-3.6/pandas/stats
creating build/lib.linux-x86_64-3.6/pandas/util
copying pandas/util/doctools.py -> build/lib.linux-x86_64-3.6/pandas/util
copying pandas/util/misc.py -> build/lib.linux-x86_64-3.6/pandas/util
copying pandas/util/decorators.py -> build/lib.linux-x86_64-3.6/pandas/util
copying pandas/util/nosetester.py -> build/lib.linux-x86_64-3.6/pandas/util
copying pandas/util/testing.py -> build/lib.linux-x86_64-3.6/pandas/util
copying pandas/util/__init__.py -> build/lib.linux-x86_64-3.6/pandas/util
copying pandas/util/terminal.py -> build/lib.linux-x86_64-3.6/pandas/util
copying pandas/util/print_versions.py -> build/lib.linux-x86_64-3.6/pandas/util
copying pandas/util/clipboard.py -> build/lib.linux-x86_64-3.6/pandas/util
creating build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_tseries.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_format.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_panelnd.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_stats.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_graphics.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_lib.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_strings.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_algos.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_panel.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_generic.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_config.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_internals.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_window.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_multilevel.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_rplot.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_expressions.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_testing.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_reshape.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_categorical.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_base.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_groupby.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/__init__.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_common.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_compat.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_graphics_others.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_nanops.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_style.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_panel4d.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_util.py -> build/lib.linux-x86_64-3.6/pandas/tests
copying pandas/tests/test_dtypes.py -> build/lib.linux-x86_64-3.6/pandas/tests
creating build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_query_eval.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_replace.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_to_csv.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_nonunique_indexes.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_indexing.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_convert_to.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_subclass.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_repr_info.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_alter_axes.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/common.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_block_internals.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_combine_concat.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_analytics.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_missing.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_reshape.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_misc_api.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_timeseries.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_apply.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_sorting.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_mutate_columns.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/__init__.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_operators.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_axis_select_reindex.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_constructors.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
copying pandas/tests/frame/test_dtypes.py -> build/lib.linux-x86_64-3.6/pandas/tests/frame
creating build/lib.linux-x86_64-3.6/pandas/tests/indexes
copying pandas/tests/indexes/test_multi.py -> build/lib.linux-x86_64-3.6/pandas/tests/indexes
copying pandas/tests/indexes/test_datetimelike.py -> build/lib.linux-x86_64-3.6/pandas/tests/indexes
copying pandas/tests/indexes/test_range.py -> build/lib.linux-x86_64-3.6/pandas/tests/indexes
copying pandas/tests/indexes/test_category.py -> build/lib.linux-x86_64-3.6/pandas/tests/indexes
copying pandas/tests/indexes/common.py -> build/lib.linux-x86_64-3.6/pandas/tests/indexes
copying pandas/tests/indexes/test_base.py -> build/lib.linux-x86_64-3.6/pandas/tests/indexes
copying pandas/tests/indexes/__init__.py -> build/lib.linux-x86_64-3.6/pandas/tests/indexes
copying pandas/tests/indexes/test_numeric.py -> build/lib.linux-x86_64-3.6/pandas/tests/indexes
creating build/lib.linux-x86_64-3.6/pandas/tests/series
copying pandas/tests/series/test_datetime_values.py -> build/lib.linux-x86_64-3.6/pandas/tests/series
copying pandas/tests/series/test_repr.py -> build/lib.linux-x86_64-3.6/pandas/tests/series
copying pandas/tests/series/test_indexing.py -> build/lib.linux-x86_64-3.6/pandas/tests/series
copying pandas/tests/series/test_internals.py -> build/lib.linux-x86_64-3.6/pandas/tests/series
copying pandas/tests/series/test_alter_axes.py -> build/lib.linux-x86_64-3.6/pandas/tests/series
copying pandas/tests/series/common.py -> build/lib.linux-x86_64-3.6/pandas/tests/series
copying pandas/tests/series/test_io.py -> build/lib.linux-x86_64-3.6/pandas/tests/series
copying pandas/tests/series/test_combine_concat.py -> build/lib.linux-x86_64-3.6/pandas/tests/series
copying pandas/tests/series/test_analytics.py -> build/lib.linux-x86_64-3.6/pandas/tests/series
copying pandas/tests/series/test_missing.py -> build/lib.linux-x86_64-3.6/pandas/tests/series
copying pandas/tests/series/test_misc_api.py -> build/lib.linux-x86_64-3.6/pandas/tests/series
copying pandas/tests/series/test_timeseries.py -> build/lib.linux-x86_64-3.6/pandas/tests/series
copying pandas/tests/series/__init__.py -> build/lib.linux-x86_64-3.6/pandas/tests/series
copying pandas/tests/series/test_operators.py -> build/lib.linux-x86_64-3.6/pandas/tests/series
copying pandas/tests/series/test_constructors.py -> build/lib.linux-x86_64-3.6/pandas/tests/series
copying pandas/tests/series/test_dtypes.py -> build/lib.linux-x86_64-3.6/pandas/tests/series
creating build/lib.linux-x86_64-3.6/pandas/tests/test_msgpack
copying pandas/tests/test_msgpack/test_format.py -> build/lib.linux-x86_64-3.6/pandas/tests/test_msgpack
copying pandas/tests/test_msgpack/test_sequnpack.py -> build/lib.linux-x86_64-3.6/pandas/tests/test_msgpack
copying pandas/tests/test_msgpack/test_obj.py -> build/lib.linux-x86_64-3.6/pandas/tests/test_msgpack
copying pandas/tests/test_msgpack/test_unpack.py -> build/lib.linux-x86_64-3.6/pandas/tests/test_msgpack
copying pandas/tests/test_msgpack/test_except.py -> build/lib.linux-x86_64-3.6/pandas/tests/test_msgpack
copying pandas/tests/test_msgpack/test_buffer.py -> build/lib.linux-x86_64-3.6/pandas/tests/test_msgpack
copying pandas/tests/test_msgpack/test_unpack_raw.py -> build/lib.linux-x86_64-3.6/pandas/tests/test_msgpack
copying pandas/tests/test_msgpack/test_newspec.py -> build/lib.linux-x86_64-3.6/pandas/tests/test_msgpack
copying pandas/tests/test_msgpack/test_pack.py -> build/lib.linux-x86_64-3.6/pandas/tests/test_msgpack
copying pandas/tests/test_msgpack/test_case.py -> build/lib.linux-x86_64-3.6/pandas/tests/test_msgpack
copying pandas/tests/test_msgpack/test_subtype.py -> build/lib.linux-x86_64-3.6/pandas/tests/test_msgpack
copying pandas/tests/test_msgpack/__init__.py -> build/lib.linux-x86_64-3.6/pandas/tests/test_msgpack
copying pandas/tests/test_msgpack/test_extension.py -> build/lib.linux-x86_64-3.6/pandas/tests/test_msgpack
copying pandas/tests/test_msgpack/test_limits.py -> build/lib.linux-x86_64-3.6/pandas/tests/test_msgpack
copying pandas/tests/test_msgpack/test_read_size.py -> build/lib.linux-x86_64-3.6/pandas/tests/test_msgpack
copying pandas/tests/test_msgpack/test_seq.py -> build/lib.linux-x86_64-3.6/pandas/tests/test_msgpack
creating build/lib.linux-x86_64-3.6/pandas/tools
copying pandas/tools/util.py -> build/lib.linux-x86_64-3.6/pandas/tools
copying pandas/tools/pivot.py -> build/lib.linux-x86_64-3.6/pandas/tools
copying pandas/tools/rplot.py -> build/lib.linux-x86_64-3.6/pandas/tools
copying pandas/tools/tile.py -> build/lib.linux-x86_64-3.6/pandas/tools
copying pandas/tools/__init__.py -> build/lib.linux-x86_64-3.6/pandas/tools
copying pandas/tools/merge.py -> build/lib.linux-x86_64-3.6/pandas/tools
copying pandas/tools/plotting.py -> build/lib.linux-x86_64-3.6/pandas/tools
creating build/lib.linux-x86_64-3.6/pandas/tools/tests
copying pandas/tools/tests/test_merge.py -> build/lib.linux-x86_64-3.6/pandas/tools/tests
copying pandas/tools/tests/test_tile.py -> build/lib.linux-x86_64-3.6/pandas/tools/tests
copying pandas/tools/tests/test_pivot.py -> build/lib.linux-x86_64-3.6/pandas/tools/tests
copying pandas/tools/tests/__init__.py -> build/lib.linux-x86_64-3.6/pandas/tools/tests
copying pandas/tools/tests/test_util.py -> build/lib.linux-x86_64-3.6/pandas/tools/tests
creating build/lib.linux-x86_64-3.6/pandas/tseries
copying pandas/tseries/base.py -> build/lib.linux-x86_64-3.6/pandas/tseries
copying pandas/tseries/util.py -> build/lib.linux-x86_64-3.6/pandas/tseries
copying pandas/tseries/interval.py -> build/lib.linux-x86_64-3.6/pandas/tseries
copying pandas/tseries/resample.py -> build/lib.linux-x86_64-3.6/pandas/tseries
copying pandas/tseries/tdi.py -> build/lib.linux-x86_64-3.6/pandas/tseries
copying pandas/tseries/tools.py -> build/lib.linux-x86_64-3.6/pandas/tseries
copying pandas/tseries/common.py -> build/lib.linux-x86_64-3.6/pandas/tseries
copying pandas/tseries/holiday.py -> build/lib.linux-x86_64-3.6/pandas/tseries
copying pandas/tseries/converter.py -> build/lib.linux-x86_64-3.6/pandas/tseries
copying pandas/tseries/frequencies.py -> build/lib.linux-x86_64-3.6/pandas/tseries
copying pandas/tseries/api.py -> build/lib.linux-x86_64-3.6/pandas/tseries
copying pandas/tseries/timedeltas.py -> build/lib.linux-x86_64-3.6/pandas/tseries
copying pandas/tseries/__init__.py -> build/lib.linux-x86_64-3.6/pandas/tseries
copying pandas/tseries/index.py -> build/lib.linux-x86_64-3.6/pandas/tseries
copying pandas/tseries/period.py -> build/lib.linux-x86_64-3.6/pandas/tseries
copying pandas/tseries/offsets.py -> build/lib.linux-x86_64-3.6/pandas/tseries
copying pandas/tseries/plotting.py -> build/lib.linux-x86_64-3.6/pandas/tseries
creating build/lib.linux-x86_64-3.6/pandas/tseries/tests
copying pandas/tseries/tests/test_holiday.py -> build/lib.linux-x86_64-3.6/pandas/tseries/tests
copying pandas/tseries/tests/test_frequencies.py -> build/lib.linux-x86_64-3.6/pandas/tseries/tests
copying pandas/tseries/tests/test_resample.py -> build/lib.linux-x86_64-3.6/pandas/tseries/tests
copying pandas/tseries/tests/test_plotting.py -> build/lib.linux-x86_64-3.6/pandas/tseries/tests
copying pandas/tseries/tests/test_tslib.py -> build/lib.linux-x86_64-3.6/pandas/tseries/tests
copying pandas/tseries/tests/test_timedeltas.py -> build/lib.linux-x86_64-3.6/pandas/tseries/tests
copying pandas/tseries/tests/test_daterange.py -> build/lib.linux-x86_64-3.6/pandas/tseries/tests
copying pandas/tseries/tests/test_offsets.py -> build/lib.linux-x86_64-3.6/pandas/tseries/tests
copying pandas/tseries/tests/test_timeseries_legacy.py -> build/lib.linux-x86_64-3.6/pandas/tseries/tests
copying pandas/tseries/tests/test_timeseries.py -> build/lib.linux-x86_64-3.6/pandas/tseries/tests
copying pandas/tseries/tests/test_base.py -> build/lib.linux-x86_64-3.6/pandas/tseries/tests
copying pandas/tseries/tests/__init__.py -> build/lib.linux-x86_64-3.6/pandas/tseries/tests
copying pandas/tseries/tests/test_period.py -> build/lib.linux-x86_64-3.6/pandas/tseries/tests
copying pandas/tseries/tests/test_timezones.py -> build/lib.linux-x86_64-3.6/pandas/tseries/tests
copying pandas/tseries/tests/test_util.py -> build/lib.linux-x86_64-3.6/pandas/tseries/tests
copying pandas/tseries/tests/test_converter.py -> build/lib.linux-x86_64-3.6/pandas/tseries/tests
creating build/lib.linux-x86_64-3.6/pandas/io/tests
copying pandas/io/tests/test_sql.py -> build/lib.linux-x86_64-3.6/pandas/io/tests
copying pandas/io/tests/test_pytables.py -> build/lib.linux-x86_64-3.6/pandas/io/tests
copying pandas/io/tests/test_pickle.py -> build/lib.linux-x86_64-3.6/pandas/io/tests
copying pandas/io/tests/test_parsers.py -> build/lib.linux-x86_64-3.6/pandas/io/tests
copying pandas/io/tests/test_stata.py -> build/lib.linux-x86_64-3.6/pandas/io/tests
copying pandas/io/tests/test_cparser.py -> build/lib.linux-x86_64-3.6/pandas/io/tests
copying pandas/io/tests/test_data.py -> build/lib.linux-x86_64-3.6/pandas/io/tests
copying pandas/io/tests/test_clipboard.py -> build/lib.linux-x86_64-3.6/pandas/io/tests
copying pandas/io/tests/test_date_converters.py -> build/lib.linux-x86_64-3.6/pandas/io/tests
copying pandas/io/tests/test_excel.py -> build/lib.linux-x86_64-3.6/pandas/io/tests
copying pandas/io/tests/test_wb.py -> build/lib.linux-x86_64-3.6/pandas/io/tests
copying pandas/io/tests/test_ga.py -> build/lib.linux-x86_64-3.6/pandas/io/tests
copying pandas/io/tests/generate_legacy_storage_files.py -> build/lib.linux-x86_64-3.6/pandas/io/tests
copying pandas/io/tests/test_json_norm.py -> build/lib.linux-x86_64-3.6/pandas/io/tests
copying pandas/io/tests/test_packers.py -> build/lib.linux-x86_64-3.6/pandas/io/tests
copying pandas/io/tests/__init__.py -> build/lib.linux-x86_64-3.6/pandas/io/tests
copying pandas/io/tests/test_common.py -> build/lib.linux-x86_64-3.6/pandas/io/tests
copying pandas/io/tests/test_html.py -> build/lib.linux-x86_64-3.6/pandas/io/tests
copying pandas/io/tests/test_gbq.py -> build/lib.linux-x86_64-3.6/pandas/io/tests
creating build/lib.linux-x86_64-3.6/pandas/io/tests/test_json
copying pandas/io/tests/test_json/test_pandas.py -> build/lib.linux-x86_64-3.6/pandas/io/tests/test_json
copying pandas/io/tests/test_json/test_ujson.py -> build/lib.linux-x86_64-3.6/pandas/io/tests/test_json
copying pandas/io/tests/test_json/__init__.py -> build/lib.linux-x86_64-3.6/pandas/io/tests/test_json
creating build/lib.linux-x86_64-3.6/pandas/stats/tests
copying pandas/stats/tests/test_math.py -> build/lib.linux-x86_64-3.6/pandas/stats/tests
copying pandas/stats/tests/test_var.py -> build/lib.linux-x86_64-3.6/pandas/stats/tests
copying pandas/stats/tests/common.py -> build/lib.linux-x86_64-3.6/pandas/stats/tests
copying pandas/stats/tests/test_fama_macbeth.py -> build/lib.linux-x86_64-3.6/pandas/stats/tests
copying pandas/stats/tests/__init__.py -> build/lib.linux-x86_64-3.6/pandas/stats/tests
copying pandas/stats/tests/test_ols.py -> build/lib.linux-x86_64-3.6/pandas/stats/tests
creating build/lib.linux-x86_64-3.6/pandas/msgpack
copying pandas/msgpack/_version.py -> build/lib.linux-x86_64-3.6/pandas/msgpack
copying pandas/msgpack/exceptions.py -> build/lib.linux-x86_64-3.6/pandas/msgpack
copying pandas/msgpack/__init__.py -> build/lib.linux-x86_64-3.6/pandas/msgpack
creating build/lib.linux-x86_64-3.6/pandas/io/tests/data
creating build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_hdf
copying pandas/io/tests/data/legacy_hdf/legacy_table_0.11.h5 -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_hdf
copying pandas/io/tests/data/legacy_hdf/pytables_native.h5 -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_hdf
copying pandas/io/tests/data/legacy_hdf/legacy_0.10.h5 -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_hdf
copying pandas/io/tests/data/legacy_hdf/datetimetz_object.h5 -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_hdf
copying pandas/io/tests/data/legacy_hdf/pytables_native2.h5 -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_hdf
copying pandas/io/tests/data/legacy_hdf/legacy.h5 -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_hdf
copying pandas/io/tests/data/legacy_hdf/legacy_table.h5 -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_hdf
creating build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle
creating build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.14.1
copying pandas/io/tests/data/legacy_pickle/0.14.1/0.14.1_x86_64_linux_2.7.8.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.14.1
creating build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.16.0
copying pandas/io/tests/data/legacy_pickle/0.16.0/0.16.0_x86_64_darwin_2.7.9.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.16.0
creating build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.10.1
copying pandas/io/tests/data/legacy_pickle/0.10.1/AMD64_windows_2.7.3.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.10.1
copying pandas/io/tests/data/legacy_pickle/0.10.1/x86_64_linux_2.7.3.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.10.1
creating build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.12.0
copying pandas/io/tests/data/legacy_pickle/0.12.0/0.12.0_AMD64_windows_2.7.3.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.12.0
copying pandas/io/tests/data/legacy_pickle/0.12.0/0.12.0_x86_64_linux_2.7.3.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.12.0
creating build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.15.0
copying pandas/io/tests/data/legacy_pickle/0.15.0/0.15.0_x86_64_linux_2.7.8.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.15.0
creating build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.16.2
copying pandas/io/tests/data/legacy_pickle/0.16.2/0.16.2_x86_64_darwin_2.7.10.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.16.2
copying pandas/io/tests/data/legacy_pickle/0.16.2/0.16.2_AMD64_windows_2.7.10.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.16.2
copying pandas/io/tests/data/legacy_pickle/0.16.2/0.16.2_AMD64_windows_3.4.3.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.16.2
copying pandas/io/tests/data/legacy_pickle/0.16.2/0.16.2_x86_64_darwin_3.4.3.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.16.2
copying pandas/io/tests/data/legacy_pickle/0.16.2/0.16.2_x86_64_linux_2.7.10.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.16.2
copying pandas/io/tests/data/legacy_pickle/0.16.2/0.16.2_x86_64_darwin_2.7.9.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.16.2
copying pandas/io/tests/data/legacy_pickle/0.16.2/0.16.2_x86_64_linux_3.4.3.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.16.2
creating build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.14.0
copying pandas/io/tests/data/legacy_pickle/0.14.0/0.14.0_x86_64_linux_2.7.8.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.14.0
copying pandas/io/tests/data/legacy_pickle/0.14.0/0.14.0_x86_64_darwin_2.7.6.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.14.0
creating build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.13.0
copying pandas/io/tests/data/legacy_pickle/0.13.0/0.13.0_i686_linux_2.7.3.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.13.0
copying pandas/io/tests/data/legacy_pickle/0.13.0/0.13.0_i686_linux_2.6.5.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.13.0
copying pandas/io/tests/data/legacy_pickle/0.13.0/0.13.0_x86_64_linux_3.3.0.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.13.0
copying pandas/io/tests/data/legacy_pickle/0.13.0/0.13.0_i686_linux_3.2.3.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.13.0
copying pandas/io/tests/data/legacy_pickle/0.13.0/0.13.0_x86_64_linux_2.7.8.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.13.0
copying pandas/io/tests/data/legacy_pickle/0.13.0/0.13.0_x86_64_darwin_2.7.6.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.13.0
copying pandas/io/tests/data/legacy_pickle/0.13.0/0.13.0_x86_64_linux_2.7.3.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.13.0
copying pandas/io/tests/data/legacy_pickle/0.13.0/0.13.0_x86_64_darwin_2.7.5.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.13.0
copying pandas/io/tests/data/legacy_pickle/0.13.0/0.13.0_AMD64_windows_2.7.3.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.13.0
creating build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.11.0
copying pandas/io/tests/data/legacy_pickle/0.11.0/0.11.0_x86_64_linux_3.3.0.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.11.0
copying pandas/io/tests/data/legacy_pickle/0.11.0/x86_64_linux_2.7.3.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.11.0
copying pandas/io/tests/data/legacy_pickle/0.11.0/x86_64_linux_3.3.0.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.11.0
creating build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.15.2
copying pandas/io/tests/data/legacy_pickle/0.15.2/0.15.2_x86_64_darwin_2.7.9.pickle -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_pickle/0.15.2
creating build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_msgpack
creating build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_msgpack/0.16.0
copying pandas/io/tests/data/legacy_msgpack/0.16.0/0.16.0_x86_64_darwin_2.7.9.msgpack -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_msgpack/0.16.0
creating build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_msgpack/0.16.2
copying pandas/io/tests/data/legacy_msgpack/0.16.2/0.16.2_x86_64_linux_2.7.10.msgpack -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_msgpack/0.16.2
copying pandas/io/tests/data/legacy_msgpack/0.16.2/0.16.2_x86_64_linux_3.4.3.msgpack -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_msgpack/0.16.2
copying pandas/io/tests/data/legacy_msgpack/0.16.2/0.16.2_x86_64_darwin_2.7.10.msgpack -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_msgpack/0.16.2
copying pandas/io/tests/data/legacy_msgpack/0.16.2/0.16.2_x86_64_darwin_2.7.9.msgpack -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_msgpack/0.16.2
copying pandas/io/tests/data/legacy_msgpack/0.16.2/0.16.2_AMD64_windows_2.7.10.msgpack -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_msgpack/0.16.2
copying pandas/io/tests/data/legacy_msgpack/0.16.2/0.16.2_x86_64_darwin_3.4.3.msgpack -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_msgpack/0.16.2
copying pandas/io/tests/data/legacy_msgpack/0.16.2/0.16.2_AMD64_windows_3.4.3.msgpack -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_msgpack/0.16.2
creating build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_msgpack/0.17.1
copying pandas/io/tests/data/legacy_msgpack/0.17.1/0.17.1_AMD64_windows_3.5.1.msgpack -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_msgpack/0.17.1
copying pandas/io/tests/data/legacy_msgpack/0.17.1/0.17.1_x86_64_darwin_2.7.11.msgpack -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_msgpack/0.17.1
copying pandas/io/tests/data/legacy_msgpack/0.17.1/0.17.1_x86_64_darwin_3.5.1.msgpack -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_msgpack/0.17.1
copying pandas/io/tests/data/legacy_msgpack/0.17.1/0.17.1_AMD64_windows_2.7.11.msgpack -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_msgpack/0.17.1
copying pandas/io/tests/data/legacy_msgpack/0.17.1/0.17.1_x86_64_linux_2.7.11.msgpack -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_msgpack/0.17.1
copying pandas/io/tests/data/legacy_msgpack/0.17.1/0.17.1_x86_64_linux_3.4.4.msgpack -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/legacy_msgpack/0.17.1
copying pandas/io/tests/data/stata6.csv -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/unicode_series.csv -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata3.csv -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test2.csv -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test1.csv.gz -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/banklist.csv -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test1.csv.bz2 -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test1.csv -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/tips.csv -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/iris.csv -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata5.csv -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata4_114.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata1_encoding.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata4_117.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata6_114.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata5_114.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata3_115.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata8_115.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata5_115.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata2_117.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata14_118.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata7_115.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata4_113.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata12_117.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata9_117.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata3_113.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata3_114.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata4_115.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata1_114.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata6_113.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/S4_EDUC1.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata1_117.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata8_113.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata9_115.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata6_117.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata2_114.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata11_115.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata6_115.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata5_113.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata2_113.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata11_117.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata3_117.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata7_117.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata2_115.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata8_117.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata10_117.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata10_115.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/stata5_117.dta -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/utf16_ex.txt -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/gbq_fake_job.txt -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/times_1904.xls -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/blank.xls -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test_multisheet.xls -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test_index_name_pre17.xls -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test2.xls -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/testskiprows.xls -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/times_1900.xls -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test_squeeze.xls -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test4.xls -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/blank_with_header.xls -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test3.xls -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test1.xls -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/testmultiindex.xls -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test_converters.xls -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test_types.xls -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test_squeeze.xlsx -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/blank.xlsx -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/testmultiindex.xlsx -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/times_1900.xlsx -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test_multisheet.xlsx -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test_converters.xlsx -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test1.xlsx -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test_types.xlsx -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test_index_name_pre17.xlsx -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/testskiprows.xlsx -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test3.xlsx -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test2.xlsx -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/blank_with_header.xlsx -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/times_1904.xlsx -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test4.xlsx -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test1.xlsm -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/times_1900.xlsm -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test_multisheet.xlsm -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/blank.xlsm -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/testmultiindex.xlsm -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test4.xlsm -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/times_1904.xlsm -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test_index_name_pre17.xlsm -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/blank_with_header.xlsm -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test3.xlsm -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/testskiprows.xlsm -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test_squeeze.xlsm -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test2.xlsm -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test_types.xlsm -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/test_converters.xlsm -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/salary.table -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/computer_sales_page.html -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/yahoo_options1.html -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/banklist.html -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/nyse_wsj.html -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/valid_markup.html -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/yahoo_options2.html -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/wikipedia_states.html -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/macau.html -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/yahoo_options3.html -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
copying pandas/io/tests/data/spam.html -> build/lib.linux-x86_64-3.6/pandas/io/tests/data
creating build/lib.linux-x86_64-3.6/pandas/io/tests/data/html_encoding
copying pandas/io/tests/data/html_encoding/chinese_utf-16.html -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/html_encoding
copying pandas/io/tests/data/html_encoding/chinese_utf-8.html -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/html_encoding
copying pandas/io/tests/data/html_encoding/letz_latin1.html -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/html_encoding
copying pandas/io/tests/data/html_encoding/chinese_utf-32.html -> build/lib.linux-x86_64-3.6/pandas/io/tests/data/html_encoding
creating build/lib.linux-x86_64-3.6/pandas/io/tests/test_json/data
copying pandas/io/tests/test_json/data/tsframe_iso_v012.json -> build/lib.linux-x86_64-3.6/pandas/io/tests/test_json/data
copying pandas/io/tests/test_json/data/tsframe_v012.json -> build/lib.linux-x86_64-3.6/pandas/io/tests/test_json/data
creating build/lib.linux-x86_64-3.6/pandas/tests/data
copying pandas/tests/data/categorical_0_14_1.pickle -> build/lib.linux-x86_64-3.6/pandas/tests/data
copying pandas/tests/data/categorical_0_15_2.pickle -> build/lib.linux-x86_64-3.6/pandas/tests/data
copying pandas/tests/data/unicode_series.csv -> build/lib.linux-x86_64-3.6/pandas/tests/data
copying pandas/tests/data/tips.csv -> build/lib.linux-x86_64-3.6/pandas/tests/data
copying pandas/tests/data/iris.csv -> build/lib.linux-x86_64-3.6/pandas/tests/data
creating build/lib.linux-x86_64-3.6/pandas/tests/indexes/data
copying pandas/tests/indexes/data/multiindex_v1.pickle -> build/lib.linux-x86_64-3.6/pandas/tests/indexes/data
copying pandas/tests/indexes/data/mindex_073.pickle -> build/lib.linux-x86_64-3.6/pandas/tests/indexes/data
copying pandas/tests/indexes/data/s2-0.12.0.pickle -> build/lib.linux-x86_64-3.6/pandas/tests/indexes/data
copying pandas/tests/indexes/data/s1-0.12.0.pickle -> build/lib.linux-x86_64-3.6/pandas/tests/indexes/data
copying pandas/tools/tests/cut_data.csv -> build/lib.linux-x86_64-3.6/pandas/tools/tests
creating build/lib.linux-x86_64-3.6/pandas/tseries/tests/data
copying pandas/tseries/tests/data/daterange_073.pickle -> build/lib.linux-x86_64-3.6/pandas/tseries/tests/data
copying pandas/tseries/tests/data/cday-0.14.1.pickle -> build/lib.linux-x86_64-3.6/pandas/tseries/tests/data
copying pandas/tseries/tests/data/series_daterange0.pickle -> build/lib.linux-x86_64-3.6/pandas/tseries/tests/data
copying pandas/tseries/tests/data/dateoffset_0_15_2.pickle -> build/lib.linux-x86_64-3.6/pandas/tseries/tests/data
copying pandas/tseries/tests/data/series.pickle -> build/lib.linux-x86_64-3.6/pandas/tseries/tests/data
copying pandas/tseries/tests/data/frame.pickle -> build/lib.linux-x86_64-3.6/pandas/tseries/tests/data
UPDATING build/lib.linux-x86_64-3.6/pandas/_version.py
set build/lib.linux-x86_64-3.6/pandas/_version.py to '0.18.0'
running build_ext
skipping 'pandas/lib.c' Cython extension (up-to-date)
building 'pandas.lib' extension
creating build/temp.linux-x86_64-3.6
creating build/temp.linux-x86_64-3.6/pandas
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ipandas/src/klib -Ipandas/src -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/lib.c -o build/temp.linux-x86_64-3.6/pandas/lib.o -Wno-unused-function
In file included from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4,
               from pandas/lib.c:242:
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 17 | #warning "Using deprecated NumPy API, disable it with " \
    |  ^~~~~~~
In file included from pandas/lib.c:247:
pandas/src/datetime_helper.h:7: warning: "PyInt_AS_LONG" redefined
  7 | #define PyInt_AS_LONG PyLong_AsLong
    |
pandas/lib.c:141: note: this is the location of the previous definition
141 |   #define PyInt_AS_LONG                PyLong_AS_LONG
    |
In file included from pandas/lib.c:249:
pandas/src/numpy_helper.h: In function ‘transfer_object_column’:
pandas/src/numpy_helper.h:152:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
152 |     for (i = 0; i < length; ++i)
    |                   ^
pandas/lib.c: In function ‘__pyx_f_6pandas_3lib_slice_get_indices_ex’:
pandas/lib.c:28383:37: warning: passing argument 1 of ‘PySlice_GetIndicesEx’ from incompatible pointer type [-Wincompatible-pointer-types]
28383 |   __pyx_t_4 = PySlice_GetIndicesEx(((PySliceObject *)__pyx_v_slc), __pyx_v_objlen, (&__pyx_v_start), (&__pyx_v_stop), (&__pyx_v_step), (&__pyx_v_length)); if (unlikely(__pyx_t_4 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1666; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
    |                                    ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
    |                                     |
    |                                     PySliceObject * {aka struct <anonymous> *}
In file included from /home/tlc/anaconda3/envs/pgcn/include/python3.6m/Python.h:101,
               from pandas/lib.c:4:
/home/tlc/anaconda3/envs/pgcn/include/python3.6m/sliceobject.h:43:48: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘PySliceObject *’ {aka ‘struct <anonymous> *’}
 43 | PyAPI_FUNC(int) PySlice_GetIndicesEx(PyObject *r, Py_ssize_t length,
    |                                      ~~~~~~~~~~^
pandas/lib.c: In function ‘__pyx_f_6pandas_3lib_slice_len’:
pandas/lib.c:28615:37: warning: passing argument 1 of ‘PySlice_GetIndicesEx’ from incompatible pointer type [-Wincompatible-pointer-types]
28615 |   __pyx_t_4 = PySlice_GetIndicesEx(((PySliceObject *)__pyx_v_slc), __pyx_v_objlen, (&__pyx_v_start), (&__pyx_v_stop), (&__pyx_v_step), (&__pyx_v_length)); if (unlikely(__pyx_t_4 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1689; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
    |                                    ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
    |                                     |
    |                                     PySliceObject * {aka struct <anonymous> *}
In file included from /home/tlc/anaconda3/envs/pgcn/include/python3.6m/Python.h:101,
               from pandas/lib.c:4:
/home/tlc/anaconda3/envs/pgcn/include/python3.6m/sliceobject.h:43:48: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘PySliceObject *’ {aka ‘struct <anonymous> *’}
 43 | PyAPI_FUNC(int) PySlice_GetIndicesEx(PyObject *r, Py_ssize_t length,
    |                                      ~~~~~~~~~~^
pandas/lib.c: In function ‘__pyx_pw_6pandas_3lib_65maybe_booleans_to_slice’:
pandas/lib.c:139:40: warning: ‘__pyx_v_end’ may be used uninitialized in this function [-Wmaybe-uninitialized]
139 |   #define PyInt_FromSsize_t            PyLong_FromSsize_t
    |                                        ^~~~~~~~~~~~~~~~~~
pandas/lib.c:12839:14: note: ‘__pyx_v_end’ was declared here
12839 |   Py_ssize_t __pyx_v_end;
    |              ^~~~~~~~~~~
pandas/lib.c:139:40: warning: ‘__pyx_v_start’ may be used uninitialized in this function [-Wmaybe-uninitialized]
139 |   #define PyInt_FromSsize_t            PyLong_FromSsize_t
    |                                        ^~~~~~~~~~~~~~~~~~
pandas/lib.c:12838:14: note: ‘__pyx_v_start’ was declared here
12838 |   Py_ssize_t __pyx_v_start;
    |              ^~~~~~~~~~~~~
pandas/lib.c: In function ‘__pyx_gb_6pandas_3lib_118generator’:
pandas/lib.c:27229:38: warning: ‘__pyx_t_22’ may be used uninitialized in this function [-Wmaybe-uninitialized]
27229 |           __pyx_cur_scope->__pyx_t_8 = __pyx_t_22;
    |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
pandas/lib.c:26367:14: warning: ‘__pyx_t_10’ may be used uninitialized in this function [-Wmaybe-uninitialized]
26367 |   Py_ssize_t __pyx_t_10;
    |              ^~~~~~~~~~
pandas/lib.c:26362:14: warning: ‘__pyx_t_5’ may be used uninitialized in this function [-Wmaybe-uninitialized]
26362 |   Py_ssize_t __pyx_t_5;
    |              ^~~~~~~~~
pandas/lib.c:26371:14: warning: ‘__pyx_t_14’ may be used uninitialized in this function [-Wmaybe-uninitialized]
26371 |   Py_ssize_t __pyx_t_14;
    |              ^~~~~~~~~~
pandas/lib.c:26368:14: warning: ‘__pyx_t_11’ may be used uninitialized in this function [-Wmaybe-uninitialized]
26368 |   Py_ssize_t __pyx_t_11;
    |              ^~~~~~~~~~
pandas/lib.c: In function ‘__pyx_pf_6pandas_3lib_185maybe_convert_objects.isra.0’:
pandas/lib.c:54366:21: warning: ‘__pyx_pybuffernd_itimedeltas.diminfo[0].strides’ may be used uninitialized in this function [-Wmaybe-uninitialized]
54366 |   __Pyx_LocalBuf_ND __pyx_pybuffernd_itimedeltas;
    |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
pandas/lib.c:55328:19: warning: ‘__pyx_pybuffernd_itimedeltas.diminfo[0].shape’ may be used uninitialized in this function [-Wmaybe-uninitialized]
55328 |         } else if (unlikely(__pyx_t_30 >= __pyx_pybuffernd_itimedeltas.diminfo[0].shape)) __pyx_t_7 = 0;
    |                   ^
pandas/lib.c:54362:21: warning: ‘__pyx_pybuffernd_idatetimes.diminfo[0].strides’ may be used uninitialized in this function [-Wmaybe-uninitialized]
54362 |   __Pyx_LocalBuf_ND __pyx_pybuffernd_idatetimes;
    |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~
pandas/lib.c:55235:19: warning: ‘__pyx_pybuffernd_idatetimes.diminfo[0].shape’ may be used uninitialized in this function [-Wmaybe-uninitialized]
55235 |         } else if (unlikely(__pyx_t_29 >= __pyx_pybuffernd_idatetimes.diminfo[0].shape)) __pyx_t_7 = 0;
    |                   ^
gcc -pthread -shared -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -L/home/tlc/anaconda3/envs/pgcn/lib -Wl,-rpath=/home/tlc/anaconda3/envs/pgcn/lib -Wl,--no-as-needed -Wl,--sysroot=/ build/temp.linux-x86_64-3.6/pandas/lib.o -o build/lib.linux-x86_64-3.6/pandas/lib.cpython-36m-x86_64-linux-gnu.so
skipping 'pandas/hashtable.c' Cython extension (up-to-date)
building 'pandas.hashtable' extension
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ipandas/src/klib -Ipandas/src -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/hashtable.c -o build/temp.linux-x86_64-3.6/pandas/hashtable.o -Wno-unused-function
In file included from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4,
               from pandas/hashtable.c:243:
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 17 | #warning "Using deprecated NumPy API, disable it with " \
    |  ^~~~~~~
In file included from pandas/hashtable.c:246:
pandas/src/numpy_helper.h: In function ‘transfer_object_column’:
pandas/src/numpy_helper.h:152:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
152 |     for (i = 0; i < length; ++i)
    |                   ^
pandas/hashtable.c: In function ‘__pyx_fuse_0__pyx_f_6pandas_9hashtable_value_count_scalar64’:
pandas/hashtable.c:17785:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘khint_t’ {aka ‘unsigned int’} [-Wsign-compare]
17785 |         for (__pyx_t_8 = 0; __pyx_t_8 < __pyx_t_7; __pyx_t_8+=1) {
    |                                       ^
pandas/hashtable.c: In function ‘__pyx_fuse_1__pyx_f_6pandas_9hashtable_value_count_scalar64’:
pandas/hashtable.c:18229:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘khint_t’ {aka ‘unsigned int’} [-Wsign-compare]
18229 |         for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) {
    |                                       ^
pandas/hashtable.c: In function ‘__pyx_f_6pandas_9hashtable_value_count_object’:
pandas/hashtable.c:18913:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘khint_t’ {aka ‘unsigned int’} [-Wsign-compare]
18913 |   for (__pyx_t_7 = 0; __pyx_t_7 < __pyx_t_6; __pyx_t_7+=1) {
    |                                 ^
pandas/hashtable.c: In function ‘__pyx_pf_6pandas_9hashtable_4mode_object’:
pandas/hashtable.c:19390:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘khint_t’ {aka ‘unsigned int’} [-Wsign-compare]
19390 |   for (__pyx_t_7 = 0; __pyx_t_7 < __pyx_t_11; __pyx_t_7+=1) {
    |                                 ^
pandas/hashtable.c: In function ‘__pyx_pf_6pandas_9hashtable_6mode_int64’:
pandas/hashtable.c:19769:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘khint_t’ {aka ‘unsigned int’} [-Wsign-compare]
19769 |         for (__pyx_t_7 = 0; __pyx_t_7 < __pyx_t_11; __pyx_t_7+=1) {
    |                                       ^
pandas/hashtable.c: In function ‘__pyx_pf_6pandas_9hashtable_8duplicated_int64’:
pandas/hashtable.c:20462:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘khint_t’ {aka ‘unsigned int’} [-Wsign-compare]
20462 |             __pyx_t_9 = ((__pyx_v_k != __pyx_v_table->n_buckets) != 0);
    |                                     ^~
gcc -pthread -shared -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -L/home/tlc/anaconda3/envs/pgcn/lib -Wl,-rpath=/home/tlc/anaconda3/envs/pgcn/lib -Wl,--no-as-needed -Wl,--sysroot=/ build/temp.linux-x86_64-3.6/pandas/hashtable.o -o build/lib.linux-x86_64-3.6/pandas/hashtable.cpython-36m-x86_64-linux-gnu.so
skipping 'pandas/tslib.c' Cython extension (up-to-date)
building 'pandas.tslib' extension
creating build/temp.linux-x86_64-3.6/pandas/src
creating build/temp.linux-x86_64-3.6/pandas/src/datetime
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ipandas/src/klib -Ipandas/src -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/tslib.c -o build/temp.linux-x86_64-3.6/pandas/tslib.o -Wno-unused-function
In file included from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4,
               from pandas/tslib.c:242:
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 17 | #warning "Using deprecated NumPy API, disable it with " \
    |  ^~~~~~~
In file included from pandas/tslib.c:246:
pandas/src/datetime_helper.h:7: warning: "PyInt_AS_LONG" redefined
  7 | #define PyInt_AS_LONG PyLong_AsLong
    |
pandas/tslib.c:141: note: this is the location of the previous definition
141 |   #define PyInt_AS_LONG                PyLong_AS_LONG
    |
In file included from pandas/tslib.c:248:
pandas/src/numpy_helper.h: In function ‘transfer_object_column’:
pandas/src/numpy_helper.h:152:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
152 |     for (i = 0; i < length; ++i)
    |                   ^
pandas/tslib.c: In function ‘__pyx_f_6pandas_5tslib__check_dts_bounds’:
pandas/tslib.c:29015:17: warning: implicit declaration of function ‘cmp_pandas_datetimestruct’ [-Wimplicit-function-declaration]
29015 |   __pyx_t_2 = ((cmp_pandas_datetimestruct(__pyx_v_dts, (&__pyx_v_6pandas_5tslib__NS_MIN_DTS)) == -1L) != 0);
    |                 ^~~~~~~~~~~~~~~~~~~~~~~~~
pandas/tslib.c: In function ‘__pyx_f_6pandas_5tslib__parse_dateabbr_string’:
pandas/tslib.c:33472:51: warning: ‘__pyx_v_quarter’ may be used uninitialized in this function [-Wmaybe-uninitialized]
33472 |           __pyx_v_month = (((__pyx_v_quarter - 1) * 3) + 1);
    |                            ~~~~~~~~~~~~~~~~~~~~~~~^~~~
pandas/tslib.c:33443:26: warning: ‘__pyx_v_year’ may be used uninitialized in this function [-Wmaybe-uninitialized]
33443 |             __pyx_v_year = (__pyx_v_year - 1);
    |             ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
pandas/tslib.c: In function ‘__pyx_pf_6pandas_5tslib_76tz_localize_to_utc.isra.0’:
pandas/tslib.c:64730:21: warning: ‘__pyx_pybuffernd_dst_hours.diminfo[0].strides’ may be used uninitialized in this function [-Wmaybe-uninitialized]
64730 |   __Pyx_LocalBuf_ND __pyx_pybuffernd_dst_hours;
    |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ipandas/src/klib -Ipandas/src -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/src/datetime/np_datetime.c -o build/temp.linux-x86_64-3.6/pandas/src/datetime/np_datetime.o -Wno-unused-function
In file included from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4,
               from pandas/src/datetime/np_datetime.c:18:
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 17 | #warning "Using deprecated NumPy API, disable it with " \
    |  ^~~~~~~
In file included from pandas/src/datetime/np_datetime.c:10:
/home/tlc/anaconda3/envs/pgcn/include/python3.6m/datetime.h:200:25: warning: ‘PyDateTimeAPI’ defined but not used [-Wunused-variable]
200 | static PyDateTime_CAPI *PyDateTimeAPI = NULL;
    |                         ^~~~~~~~~~~~~
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ipandas/src/klib -Ipandas/src -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/src/datetime/np_datetime_strings.c -o build/temp.linux-x86_64-3.6/pandas/src/datetime/np_datetime_strings.o -Wno-unused-function
In file included from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4,
               from pandas/src/datetime/np_datetime_strings.c:17:
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 17 | #warning "Using deprecated NumPy API, disable it with " \
    |  ^~~~~~~
pandas/src/datetime/np_datetime_strings.c: In function ‘parse_iso_8601_datetime’:
pandas/src/datetime/np_datetime_strings.c:463:18: warning: comparison of integer expressions of different signedness: ‘PANDAS_DATETIMEUNIT’ {aka ‘enum <anonymous>’} and ‘int’ [-Wsign-compare]
463 |         if (unit != -1 && !can_cast_datetime64_units(bestunit, unit,
    |                  ^~
pandas/src/datetime/np_datetime_strings.c:506:18: warning: comparison of integer expressions of different signedness: ‘PANDAS_DATETIMEUNIT’ {aka ‘enum <anonymous>’} and ‘int’ [-Wsign-compare]
506 |         if (unit != -1 && !can_cast_datetime64_units(bestunit, unit,
    |                  ^~
pandas/src/datetime/np_datetime_strings.c:978:14: warning: comparison of integer expressions of different signedness: ‘PANDAS_DATETIMEUNIT’ {aka ‘enum <anonymous>’} and ‘int’ [-Wsign-compare]
978 |     if (unit != -1 && !can_cast_datetime64_units(bestunit, unit,
    |              ^~
pandas/src/datetime/np_datetime_strings.c: In function ‘get_datetime_iso_8601_strlen’:
pandas/src/datetime/np_datetime_strings.c:1009:14: warning: comparison of integer expressions of different signedness: ‘PANDAS_DATETIMEUNIT’ {aka ‘enum <anonymous>’} and ‘int’ [-Wsign-compare]
1009 |     if (base == -1) {
    |              ^~
pandas/src/datetime/np_datetime_strings.c: In function ‘make_iso_8601_datetime’:
pandas/src/datetime/np_datetime_strings.c:1150:14: warning: comparison of integer expressions of different signedness: ‘PANDAS_DATETIMEUNIT’ {aka ‘enum <anonymous>’} and ‘int’ [-Wsign-compare]
1150 |     if (base == -1) {
    |              ^~
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ipandas/src/klib -Ipandas/src -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/src/period_helper.c -o build/temp.linux-x86_64-3.6/pandas/src/period_helper.o -Wno-unused-function
In file included from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
               from pandas/src/period_helper.h:12,
               from pandas/src/period_helper.c:1:
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 17 | #warning "Using deprecated NumPy API, disable it with " \
    |  ^~~~~~~
gcc -pthread -shared -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -L/home/tlc/anaconda3/envs/pgcn/lib -Wl,-rpath=/home/tlc/anaconda3/envs/pgcn/lib -Wl,--no-as-needed -Wl,--sysroot=/ build/temp.linux-x86_64-3.6/pandas/tslib.o build/temp.linux-x86_64-3.6/pandas/src/datetime/np_datetime.o build/temp.linux-x86_64-3.6/pandas/src/datetime/np_datetime_strings.o build/temp.linux-x86_64-3.6/pandas/src/period_helper.o -o build/lib.linux-x86_64-3.6/pandas/tslib.cpython-36m-x86_64-linux-gnu.so
skipping 'pandas/src/period.c' Cython extension (up-to-date)
building 'pandas._period' extension
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ipandas/src/klib -Ipandas/src -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/src/period.c -o build/temp.linux-x86_64-3.6/pandas/src/period.o -Wno-unused-function
In file included from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4,
               from pandas/src/period.c:243:
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 17 | #warning "Using deprecated NumPy API, disable it with " \
    |  ^~~~~~~
In file included from pandas/src/period.c:245:
pandas/src/datetime_helper.h:7: warning: "PyInt_AS_LONG" redefined
  7 | #define PyInt_AS_LONG PyLong_AsLong
    |
pandas/src/period.c:141: note: this is the location of the previous definition
141 |   #define PyInt_AS_LONG                PyLong_AS_LONG
    |
In file included from pandas/src/period.c:249:
pandas/src/numpy_helper.h: In function ‘transfer_object_column’:
pandas/src/numpy_helper.h:152:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
152 |     for (i = 0; i < length; ++i)
    |                   ^
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ipandas/src/klib -Ipandas/src -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/src/datetime/np_datetime.c -o build/temp.linux-x86_64-3.6/pandas/src/datetime/np_datetime.o -Wno-unused-function
In file included from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4,
               from pandas/src/datetime/np_datetime.c:18:
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 17 | #warning "Using deprecated NumPy API, disable it with " \
    |  ^~~~~~~
In file included from pandas/src/datetime/np_datetime.c:10:
/home/tlc/anaconda3/envs/pgcn/include/python3.6m/datetime.h:200:25: warning: ‘PyDateTimeAPI’ defined but not used [-Wunused-variable]
200 | static PyDateTime_CAPI *PyDateTimeAPI = NULL;
    |                         ^~~~~~~~~~~~~
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ipandas/src/klib -Ipandas/src -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/src/datetime/np_datetime_strings.c -o build/temp.linux-x86_64-3.6/pandas/src/datetime/np_datetime_strings.o -Wno-unused-function
In file included from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4,
               from pandas/src/datetime/np_datetime_strings.c:17:
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 17 | #warning "Using deprecated NumPy API, disable it with " \
    |  ^~~~~~~
pandas/src/datetime/np_datetime_strings.c: In function ‘parse_iso_8601_datetime’:
pandas/src/datetime/np_datetime_strings.c:463:18: warning: comparison of integer expressions of different signedness: ‘PANDAS_DATETIMEUNIT’ {aka ‘enum <anonymous>’} and ‘int’ [-Wsign-compare]
463 |         if (unit != -1 && !can_cast_datetime64_units(bestunit, unit,
    |                  ^~
pandas/src/datetime/np_datetime_strings.c:506:18: warning: comparison of integer expressions of different signedness: ‘PANDAS_DATETIMEUNIT’ {aka ‘enum <anonymous>’} and ‘int’ [-Wsign-compare]
506 |         if (unit != -1 && !can_cast_datetime64_units(bestunit, unit,
    |                  ^~
pandas/src/datetime/np_datetime_strings.c:978:14: warning: comparison of integer expressions of different signedness: ‘PANDAS_DATETIMEUNIT’ {aka ‘enum <anonymous>’} and ‘int’ [-Wsign-compare]
978 |     if (unit != -1 && !can_cast_datetime64_units(bestunit, unit,
    |              ^~
pandas/src/datetime/np_datetime_strings.c: In function ‘get_datetime_iso_8601_strlen’:
pandas/src/datetime/np_datetime_strings.c:1009:14: warning: comparison of integer expressions of different signedness: ‘PANDAS_DATETIMEUNIT’ {aka ‘enum <anonymous>’} and ‘int’ [-Wsign-compare]
1009 |     if (base == -1) {
    |              ^~
pandas/src/datetime/np_datetime_strings.c: In function ‘make_iso_8601_datetime’:
pandas/src/datetime/np_datetime_strings.c:1150:14: warning: comparison of integer expressions of different signedness: ‘PANDAS_DATETIMEUNIT’ {aka ‘enum <anonymous>’} and ‘int’ [-Wsign-compare]
1150 |     if (base == -1) {
    |              ^~
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ipandas/src/klib -Ipandas/src -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/src/period_helper.c -o build/temp.linux-x86_64-3.6/pandas/src/period_helper.o -Wno-unused-function
In file included from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
               from pandas/src/period_helper.h:12,
               from pandas/src/period_helper.c:1:
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 17 | #warning "Using deprecated NumPy API, disable it with " \
    |  ^~~~~~~
gcc -pthread -shared -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -L/home/tlc/anaconda3/envs/pgcn/lib -Wl,-rpath=/home/tlc/anaconda3/envs/pgcn/lib -Wl,--no-as-needed -Wl,--sysroot=/ build/temp.linux-x86_64-3.6/pandas/src/period.o build/temp.linux-x86_64-3.6/pandas/src/datetime/np_datetime.o build/temp.linux-x86_64-3.6/pandas/src/datetime/np_datetime_strings.o build/temp.linux-x86_64-3.6/pandas/src/period_helper.o -o build/lib.linux-x86_64-3.6/pandas/_period.cpython-36m-x86_64-linux-gnu.so
skipping 'pandas/index.c' Cython extension (up-to-date)
building 'pandas.index' extension
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ipandas/src/klib -Ipandas/src -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/index.c -o build/temp.linux-x86_64-3.6/pandas/index.o -Wno-unused-function
In file included from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4,
               from pandas/index.c:242:
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 17 | #warning "Using deprecated NumPy API, disable it with " \
    |  ^~~~~~~
In file included from pandas/index.c:244:
pandas/src/numpy_helper.h: In function ‘transfer_object_column’:
pandas/src/numpy_helper.h:152:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
152 |     for (i = 0; i < length; ++i)
    |                   ^
In file included from pandas/index.c:249:
pandas/src/datetime_helper.h: At top level:
pandas/src/datetime_helper.h:7: warning: "PyInt_AS_LONG" redefined
  7 | #define PyInt_AS_LONG PyLong_AsLong
    |
pandas/index.c:141: note: this is the location of the previous definition
141 |   #define PyInt_AS_LONG                PyLong_AS_LONG
    |
pandas/index.c: In function ‘__pyx_f_6pandas_5index_11IndexEngine_get_loc’:
pandas/index.c:139:40: warning: ‘__pyx_v_mid’ may be used uninitialized in this function [-Wmaybe-uninitialized]
139 |   #define PyInt_FromSsize_t            PyLong_FromSsize_t
    |                                        ^~~~~~~~~~~~~~~~~~
pandas/index.c:9125:14: note: ‘__pyx_v_mid’ was declared here
9125 |   Py_ssize_t __pyx_v_mid;
    |              ^~~~~~~~~~~
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ipandas/src/klib -Ipandas/src -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/src/datetime/np_datetime.c -o build/temp.linux-x86_64-3.6/pandas/src/datetime/np_datetime.o -Wno-unused-function
In file included from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4,
               from pandas/src/datetime/np_datetime.c:18:
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 17 | #warning "Using deprecated NumPy API, disable it with " \
    |  ^~~~~~~
In file included from pandas/src/datetime/np_datetime.c:10:
/home/tlc/anaconda3/envs/pgcn/include/python3.6m/datetime.h:200:25: warning: ‘PyDateTimeAPI’ defined but not used [-Wunused-variable]
200 | static PyDateTime_CAPI *PyDateTimeAPI = NULL;
    |                         ^~~~~~~~~~~~~
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ipandas/src/klib -Ipandas/src -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/src/datetime/np_datetime_strings.c -o build/temp.linux-x86_64-3.6/pandas/src/datetime/np_datetime_strings.o -Wno-unused-function
In file included from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4,
               from pandas/src/datetime/np_datetime_strings.c:17:
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 17 | #warning "Using deprecated NumPy API, disable it with " \
    |  ^~~~~~~
pandas/src/datetime/np_datetime_strings.c: In function ‘parse_iso_8601_datetime’:
pandas/src/datetime/np_datetime_strings.c:463:18: warning: comparison of integer expressions of different signedness: ‘PANDAS_DATETIMEUNIT’ {aka ‘enum <anonymous>’} and ‘int’ [-Wsign-compare]
463 |         if (unit != -1 && !can_cast_datetime64_units(bestunit, unit,
    |                  ^~
pandas/src/datetime/np_datetime_strings.c:506:18: warning: comparison of integer expressions of different signedness: ‘PANDAS_DATETIMEUNIT’ {aka ‘enum <anonymous>’} and ‘int’ [-Wsign-compare]
506 |         if (unit != -1 && !can_cast_datetime64_units(bestunit, unit,
    |                  ^~
pandas/src/datetime/np_datetime_strings.c:978:14: warning: comparison of integer expressions of different signedness: ‘PANDAS_DATETIMEUNIT’ {aka ‘enum <anonymous>’} and ‘int’ [-Wsign-compare]
978 |     if (unit != -1 && !can_cast_datetime64_units(bestunit, unit,
    |              ^~
pandas/src/datetime/np_datetime_strings.c: In function ‘get_datetime_iso_8601_strlen’:
pandas/src/datetime/np_datetime_strings.c:1009:14: warning: comparison of integer expressions of different signedness: ‘PANDAS_DATETIMEUNIT’ {aka ‘enum <anonymous>’} and ‘int’ [-Wsign-compare]
1009 |     if (base == -1) {
    |              ^~
pandas/src/datetime/np_datetime_strings.c: In function ‘make_iso_8601_datetime’:
pandas/src/datetime/np_datetime_strings.c:1150:14: warning: comparison of integer expressions of different signedness: ‘PANDAS_DATETIMEUNIT’ {aka ‘enum <anonymous>’} and ‘int’ [-Wsign-compare]
1150 |     if (base == -1) {
    |              ^~
gcc -pthread -shared -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -L/home/tlc/anaconda3/envs/pgcn/lib -Wl,-rpath=/home/tlc/anaconda3/envs/pgcn/lib -Wl,--no-as-needed -Wl,--sysroot=/ build/temp.linux-x86_64-3.6/pandas/index.o build/temp.linux-x86_64-3.6/pandas/src/datetime/np_datetime.o build/temp.linux-x86_64-3.6/pandas/src/datetime/np_datetime_strings.o -o build/lib.linux-x86_64-3.6/pandas/index.cpython-36m-x86_64-linux-gnu.so
skipping 'pandas/algos.c' Cython extension (up-to-date)
building 'pandas.algos' extension
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ipandas/src/klib -Ipandas/src -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/algos.c -o build/temp.linux-x86_64-3.6/pandas/algos.o -Wno-unused-function
In file included from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4,
               from pandas/algos.c:242:
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 17 | #warning "Using deprecated NumPy API, disable it with " \
    |  ^~~~~~~
In file included from pandas/algos.c:244:
pandas/src/numpy_helper.h: In function ‘transfer_object_column’:
pandas/src/numpy_helper.h:152:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
152 |     for (i = 0; i < length; ++i)
    |                   ^
In file included from pandas/algos.c:252:
pandas/src/datetime_helper.h: At top level:
pandas/src/datetime_helper.h:7: warning: "PyInt_AS_LONG" redefined
  7 | #define PyInt_AS_LONG PyLong_AsLong
    |
pandas/algos.c:141: note: this is the location of the previous definition
141 |   #define PyInt_AS_LONG                PyLong_AS_LONG
    |
pandas/algos.c: In function ‘__pyx_pf_6pandas_5algos_404group_last_int64’:
pandas/algos.c:139621:40: warning: self-comparison always evaluates to true [-Wtautological-compare]
139621 |             __pyx_t_22 = ((__pyx_v_val == __pyx_v_val) != 0);
     |                                        ^~
pandas/algos.c: In function ‘__pyx_pf_6pandas_5algos_410group_nth_int64’:
pandas/algos.c:141829:40: warning: self-comparison always evaluates to true [-Wtautological-compare]
141829 |             __pyx_t_22 = ((__pyx_v_val == __pyx_v_val) != 0);
     |                                        ^~
pandas/algos.c: In function ‘__pyx_pf_6pandas_5algos_416group_min_int64’:
pandas/algos.c:144507:42: warning: self-comparison always evaluates to true [-Wtautological-compare]
144507 |               __pyx_t_20 = ((__pyx_v_val == __pyx_v_val) != 0);
     |                                          ^~
pandas/algos.c:144661:40: warning: self-comparison always evaluates to true [-Wtautological-compare]
144661 |             __pyx_t_20 = ((__pyx_v_val == __pyx_v_val) != 0);
     |                                        ^~
pandas/algos.c: In function ‘__pyx_pf_6pandas_5algos_422group_max_int64’:
pandas/algos.c:147345:42: warning: self-comparison always evaluates to true [-Wtautological-compare]
147345 |               __pyx_t_20 = ((__pyx_v_val == __pyx_v_val) != 0);
     |                                          ^~
pandas/algos.c:147499:40: warning: self-comparison always evaluates to true [-Wtautological-compare]
147499 |             __pyx_t_20 = ((__pyx_v_val == __pyx_v_val) != 0);
     |                                        ^~
pandas/algos.c: In function ‘__pyx_pf_6pandas_5algos_518group_cumsum’:
pandas/algos.c:150047:40: warning: self-comparison always evaluates to true [-Wtautological-compare]
150047 |             __pyx_t_11 = ((__pyx_v_val == __pyx_v_val) != 0);
     |                                        ^~
pandas/algos.c: In function ‘__pyx_pf_6pandas_5algos_520group_cumsum’:
pandas/algos.c:150459:40: warning: self-comparison always evaluates to true [-Wtautological-compare]
150459 |             __pyx_t_11 = ((__pyx_v_val == __pyx_v_val) != 0);
     |                                        ^~
pandas/algos.c: In function ‘__pyx_pf_6pandas_5algos_522group_cumsum’:
pandas/algos.c:150871:40: warning: self-comparison always evaluates to true [-Wtautological-compare]
150871 |             __pyx_t_11 = ((__pyx_v_val == __pyx_v_val) != 0);
     |                                        ^~
pandas/algos.c: In function ‘__pyx_pf_6pandas_5algos_524group_cumsum’:
pandas/algos.c:151283:40: warning: self-comparison always evaluates to true [-Wtautological-compare]
151283 |             __pyx_t_11 = ((__pyx_v_val == __pyx_v_val) != 0);
     |                                        ^~
pandas/algos.c: In function ‘__pyx_pf_6pandas_5algos_526group_cumsum’:
pandas/algos.c:151695:40: warning: self-comparison always evaluates to true [-Wtautological-compare]
151695 |             __pyx_t_11 = ((__pyx_v_val == __pyx_v_val) != 0);
     |                                        ^~
pandas/algos.c: In function ‘__pyx_pf_6pandas_5algos_528group_cumsum’:
pandas/algos.c:152107:40: warning: self-comparison always evaluates to true [-Wtautological-compare]
152107 |             __pyx_t_11 = ((__pyx_v_val == __pyx_v_val) != 0);
     |                                        ^~
pandas/algos.c: In function ‘__pyx_pf_6pandas_5algos_530group_cumsum’:
pandas/algos.c:152519:40: warning: self-comparison always evaluates to true [-Wtautological-compare]
152519 |             __pyx_t_11 = ((__pyx_v_val == __pyx_v_val) != 0);
     |                                        ^~
pandas/algos.c: In function ‘__pyx_pf_6pandas_5algos_532group_cumsum’:
pandas/algos.c:152931:40: warning: self-comparison always evaluates to true [-Wtautological-compare]
152931 |             __pyx_t_11 = ((__pyx_v_val == __pyx_v_val) != 0);
     |                                        ^~
pandas/algos.c: In function ‘__pyx_pf_6pandas_5algos_50roll_window.isra.0’:
pandas/algos.c:41642:167: warning: ‘__pyx_pybuffernd_tot_wgt.diminfo[0].strides’ may be used uninitialized in this function [-Wmaybe-uninitialized]
41642 |           *__Pyx_BufPtrStrided1d(__pyx_t_5numpy_double_t *, __pyx_pybuffernd_tot_wgt.rcbuffer->pybuffer.buf, __pyx_t_20, __pyx_pybuffernd_tot_wgt.diminfo[0].strides) += __pyx_v_val_win;
    |                                                                                                                                                                       ^~
pandas/algos.c:41637:21: warning: ‘__pyx_pybuffernd_tot_wgt.diminfo[0].shape’ may be used uninitialized in this function [-Wmaybe-uninitialized]
41637 |           } else if (unlikely(__pyx_t_20 >= __pyx_pybuffernd_tot_wgt.diminfo[0].shape)) __pyx_t_7 = 0;
    |                     ^
pandas/algos.c: In function ‘__pyx_pw_6pandas_5algos_431group_shift_indexer’:
pandas/algos.c:153935:7: warning: ‘__pyx_v_offset’ may be used uninitialized in this function [-Wmaybe-uninitialized]
153935 |   int __pyx_v_offset;
     |       ^~~~~~~~~~~~~~
gcc -pthread -shared -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -L/home/tlc/anaconda3/envs/pgcn/lib -Wl,-rpath=/home/tlc/anaconda3/envs/pgcn/lib -Wl,--no-as-needed -Wl,--sysroot=/ build/temp.linux-x86_64-3.6/pandas/algos.o -o build/lib.linux-x86_64-3.6/pandas/algos.cpython-36m-x86_64-linux-gnu.so
skipping 'pandas/parser.c' Cython extension (up-to-date)
building 'pandas.parser' extension
creating build/temp.linux-x86_64-3.6/pandas/src/parser
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ipandas/src/klib -Ipandas/src -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/parser.c -o build/temp.linux-x86_64-3.6/pandas/parser.o -Wno-unused-function
In file included from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4,
               from pandas/parser.c:243:
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 17 | #warning "Using deprecated NumPy API, disable it with " \
    |  ^~~~~~~
In file included from pandas/parser.c:245:
pandas/src/numpy_helper.h: In function ‘transfer_object_column’:
pandas/src/numpy_helper.h:152:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
152 |     for (i = 0; i < length; ++i)
    |                   ^
pandas/parser.c: In function ‘__pyx_f_6pandas_6parser_10TextReader__get_header’:
pandas/parser.c:6483:49: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
6483 |       __pyx_t_2 = ((__pyx_v_self->parser->lines < (__pyx_v_hr + 1)) != 0);
    |                                                 ^
pandas/parser.c:6551:49: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
6551 |       __pyx_t_2 = ((__pyx_v_self->parser->lines < (__pyx_v_hr + 1)) != 0);
    |                                                 ^
pandas/parser.c:7540:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
7540 |   __pyx_t_8 = ((__pyx_v_self->parser->lines < (__pyx_v_data_line + 1)) != 0);
    |                                             ^
pandas/parser.c:7599:23: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
7599 |       if (((__pyx_t_4 > __pyx_t_7) != 0)) {
    |                       ^
pandas/parser.c:7670:34: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
7670 |       __pyx_t_2 = ((__pyx_v_nuse == __pyx_v_passed_count) != 0);
    |                                  ^~
pandas/parser.c:7706:35: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
7706 |       __pyx_t_17 = ((__pyx_v_nuse < __pyx_v_passed_count) != 0);
    |                                   ^
pandas/parser.c: In function ‘__pyx_f_6pandas_6parser__string_box_factorize’:
pandas/parser.c:17999:35: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
17999 |   for (__pyx_t_12 = 0; __pyx_t_12 < __pyx_t_11; __pyx_t_12+=1) {
    |                                   ^
pandas/parser.c: In function ‘__pyx_f_6pandas_6parser__string_box_utf8’:
pandas/parser.c:18449:35: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
18449 |   for (__pyx_t_12 = 0; __pyx_t_12 < __pyx_t_11; __pyx_t_12+=1) {
    |                                   ^
pandas/parser.c: In function ‘__pyx_f_6pandas_6parser__string_box_decode’:
pandas/parser.c:18910:35: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
18910 |   for (__pyx_t_12 = 0; __pyx_t_12 < __pyx_t_11; __pyx_t_12+=1) {
    |                                   ^
pandas/parser.c: In function ‘__pyx_f_6pandas_6parser__apply_converter’:
pandas/parser.c:25457:37: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
25457 |     for (__pyx_t_14 = 0; __pyx_t_14 < __pyx_t_13; __pyx_t_14+=1) {
    |                                     ^
pandas/parser.c:25577:37: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
25577 |     for (__pyx_t_14 = 0; __pyx_t_14 < __pyx_t_13; __pyx_t_14+=1) {
    |                                     ^
pandas/parser.c:25671:37: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
25671 |     for (__pyx_t_14 = 0; __pyx_t_14 < __pyx_t_13; __pyx_t_14+=1) {
    |                                     ^
pandas/parser.c: In function ‘__pyx_f_6pandas_6parser__fill_structured_column’:
pandas/parser.c:26520:35: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
26520 |     for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) {
    |                                   ^
pandas/parser.c: In function ‘__pyx_f_6pandas_6parser_10TextReader__get_header’:
pandas/parser.c:6332:10: warning: ‘__pyx_v_data_line’ may be used uninitialized in this function [-Wmaybe-uninitialized]
6332 |   size_t __pyx_v_data_line;
    |          ^~~~~~~~~~~~~~~~~
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ipandas/src/klib -Ipandas/src -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/src/parser/tokenizer.c -o build/temp.linux-x86_64-3.6/pandas/src/parser/tokenizer.o -Wno-unused-function
pandas/src/parser/tokenizer.c: In function ‘tokenize_delimited’:
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:748:17: note: in expansion of macro ‘END_LINE’
748 |                 END_LINE();
    |                 ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:760:21: note: in expansion of macro ‘END_LINE’
760 |                     END_LINE();
    |                     ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:772:21: note: in expansion of macro ‘END_LINE’
772 |                     END_LINE();
    |                     ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:803:17: note: in expansion of macro ‘END_LINE’
803 |                 END_LINE();
    |                 ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:888:17: note: in expansion of macro ‘END_LINE’
888 |                 END_LINE();
    |                 ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:960:17: note: in expansion of macro ‘END_LINE’
960 |                 END_LINE();
    |                 ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:981:17: note: in expansion of macro ‘END_LINE’
981 |                 END_LINE();
    |                 ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:989:17: note: in expansion of macro ‘END_LINE’
989 |                 END_LINE();
    |                 ^~~~~~~~
pandas/src/parser/tokenizer.c:686:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
686 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:993:17: note: in expansion of macro ‘END_LINE_AND_FIELD_STATE’
993 |                 END_LINE_AND_FIELD_STATE(START_FIELD);
    |                 ^~~~~~~~~~~~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:1008:51: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
1008 |                 if (line_limit > 0 && self->lines == start_lines + line_limit) {
    |                                                   ^~
pandas/src/parser/tokenizer.c: In function ‘tokenize_delim_customterm’:
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:1086:17: note: in expansion of macro ‘END_LINE’
1086 |                 END_LINE();
    |                 ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:1095:21: note: in expansion of macro ‘END_LINE’
1095 |                     END_LINE();
    |                     ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:1107:21: note: in expansion of macro ‘END_LINE’
1107 |                     END_LINE();
    |                     ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:1127:17: note: in expansion of macro ‘END_LINE’
1127 |                 END_LINE();
    |                 ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:1196:17: note: in expansion of macro ‘END_LINE’
1196 |                 END_LINE();
    |                 ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:1262:17: note: in expansion of macro ‘END_LINE’
1262 |                 END_LINE();
    |                 ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:1286:17: note: in expansion of macro ‘END_LINE’
1286 |                 END_LINE();
    |                 ^~~~~~~~
pandas/src/parser/tokenizer.c: In function ‘tokenize_whitespace’:
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:1350:17: note: in expansion of macro ‘END_LINE’
1350 |                 END_LINE();
    |                 ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:1372:17: note: in expansion of macro ‘END_LINE’
1372 |                 END_LINE();
    |                 ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:1392:21: note: in expansion of macro ‘END_LINE’
1392 |                     END_LINE();
    |                     ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:1403:21: note: in expansion of macro ‘END_LINE’
1403 |                     END_LINE();
    |                     ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:1433:17: note: in expansion of macro ‘END_LINE’
1433 |                 END_LINE();
    |                 ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:1491:17: note: in expansion of macro ‘END_LINE’
1491 |                 END_LINE();
    |                 ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:1563:17: note: in expansion of macro ‘END_LINE’
1563 |                 END_LINE();
    |                 ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:1584:17: note: in expansion of macro ‘END_LINE’
1584 |                 END_LINE();
    |                 ^~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:1588:17: note: in expansion of macro ‘END_LINE_STATE’
1588 |                 END_LINE_STATE(EAT_WHITESPACE);
    |                 ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:1595:17: note: in expansion of macro ‘END_LINE_STATE’
1595 |                 END_LINE_STATE(START_RECORD);
    |                 ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:670:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
670 |     if (line_limit > 0 && self->lines == start_lines + line_limit) {    \
    |                                       ^~
pandas/src/parser/tokenizer.c:691:20: note: in expansion of macro ‘END_LINE_STATE’
691 | #define END_LINE() END_LINE_STATE(START_RECORD)
    |                    ^~~~~~~~~~~~~~
pandas/src/parser/tokenizer.c:1610:17: note: in expansion of macro ‘END_LINE’
1610 |                 END_LINE();
    |                 ^~~~~~~~
pandas/src/parser/tokenizer.c: In function ‘parser_consume_rows’:
pandas/src/parser/tokenizer.c:1689:15: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
1689 |     if (nrows > self->lines) {
    |               ^
pandas/src/parser/tokenizer.c:1732:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
1732 |     for (i = 0; i < self->lines - nrows + 1; ++i)
    |                   ^
pandas/src/parser/tokenizer.c: In function ‘parser_trim_buffers’:
pandas/src/parser/tokenizer.c:1765:17: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
1765 |     if (new_cap < self->stream_cap) {
    |                 ^
pandas/src/parser/tokenizer.c:1778:17: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
1778 |     if (new_cap < self->words_cap) {
    |                 ^
pandas/src/parser/tokenizer.c:1797:17: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
1797 |     if (new_cap < self->lines_cap) {
    |                 ^
pandas/src/parser/tokenizer.c: In function ‘_tokenize_helper’:
pandas/src/parser/tokenizer.c:1868:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
1868 |         if (!all && self->lines - start_lines >= nrows)
    |                                               ^~
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ipandas/src/klib -Ipandas/src -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/src/parser/io.c -o build/temp.linux-x86_64-3.6/pandas/src/parser/io.o -Wno-unused-function
pandas/src/parser/io.c: In function ‘buffer_mmap_bytes’:
pandas/src/parser/io.c:248:32: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘off_t’ {aka ‘long int’} [-Wsign-compare]
248 |     if (src->position + nbytes > src->last_pos) {
    |                                ^
gcc -pthread -shared -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -L/home/tlc/anaconda3/envs/pgcn/lib -Wl,-rpath=/home/tlc/anaconda3/envs/pgcn/lib -Wl,--no-as-needed -Wl,--sysroot=/ build/temp.linux-x86_64-3.6/pandas/parser.o build/temp.linux-x86_64-3.6/pandas/src/parser/tokenizer.o build/temp.linux-x86_64-3.6/pandas/src/parser/io.o -o build/lib.linux-x86_64-3.6/pandas/parser.cpython-36m-x86_64-linux-gnu.so
skipping 'pandas/io/sas/saslib.c' Cython extension (up-to-date)
building 'pandas.io.sas.saslib' extension
creating build/temp.linux-x86_64-3.6/pandas/io
creating build/temp.linux-x86_64-3.6/pandas/io/sas
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ipandas/src/klib -Ipandas/src -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/io/sas/saslib.c -o build/temp.linux-x86_64-3.6/pandas/io/sas/saslib.o -Wno-unused-function
In file included from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4,
               from pandas/io/sas/saslib.c:242:
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 17 | #warning "Using deprecated NumPy API, disable it with " \
    |  ^~~~~~~
pandas/io/sas/saslib.c: In function ‘__pyx_pf_6pandas_2io_3sas_6saslib_2_rdc_decompress.isra.0’:
pandas/io/sas/saslib.c:3922:65: warning: ‘__pyx_v_ctrl_bits’ may be used uninitialized in this function [-Wmaybe-uninitialized]
3922 |     __pyx_t_8 = (((__pyx_v_ctrl_bits & __pyx_v_ctrl_mask) == 0) != 0);
    |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
gcc -pthread -shared -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -L/home/tlc/anaconda3/envs/pgcn/lib -Wl,-rpath=/home/tlc/anaconda3/envs/pgcn/lib -Wl,--no-as-needed -Wl,--sysroot=/ build/temp.linux-x86_64-3.6/pandas/io/sas/saslib.o -o build/lib.linux-x86_64-3.6/pandas/io/sas/saslib.cpython-36m-x86_64-linux-gnu.so
skipping 'pandas/src/sparse.c' Cython extension (up-to-date)
building 'pandas._sparse' extension
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/src/sparse.c -o build/temp.linux-x86_64-3.6/pandas/src/sparse.o -Wno-unused-function
In file included from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
               from /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4,
               from pandas/src/sparse.c:242:
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 17 | #warning "Using deprecated NumPy API, disable it with " \
    |  ^~~~~~~
gcc -pthread -shared -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -L/home/tlc/anaconda3/envs/pgcn/lib -Wl,-rpath=/home/tlc/anaconda3/envs/pgcn/lib -Wl,--no-as-needed -Wl,--sysroot=/ build/temp.linux-x86_64-3.6/pandas/src/sparse.o -lm -o build/lib.linux-x86_64-3.6/pandas/_sparse.cpython-36m-x86_64-linux-gnu.so
skipping 'pandas/src/testing.c' Cython extension (up-to-date)
building 'pandas._testing' extension
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/src/testing.c -o build/temp.linux-x86_64-3.6/pandas/src/testing.o -Wno-unused-function
gcc -pthread -shared -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -L/home/tlc/anaconda3/envs/pgcn/lib -Wl,-rpath=/home/tlc/anaconda3/envs/pgcn/lib -Wl,--no-as-needed -Wl,--sysroot=/ build/temp.linux-x86_64-3.6/pandas/src/testing.o -lm -o build/lib.linux-x86_64-3.6/pandas/_testing.cpython-36m-x86_64-linux-gnu.so
skipping 'pandas/msgpack/_packer.cpp' Cython extension (up-to-date)
building 'pandas.msgpack._packer' extension
creating build/temp.linux-x86_64-3.6/pandas/msgpack
gcc -pthread -B /home/tlc/anaconda3/envs/pgcn/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -D__LITTLE_ENDIAN__=1 -Ipandas/src/msgpack -Ipandas/src/klib -Ipandas/src -I/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/numpy/core/include -I/home/tlc/anaconda3/envs/pgcn/include/python3.6m -c pandas/msgpack/_packer.cpp -o build/temp.linux-x86_64-3.6/pandas/msgpack/_packer.o -Wno-unused-function
gcc: fatal error: cannot execute ‘cc1plus’: execvp: No such file or directory
compilation terminated.
error: command 'gcc' failed with exit status 1
----------------------------------------
ERROR: Failed building wheel for pandas
Running setup.py clean for pandas
Failed to build pandas
Installing collected packages: pandas
Attempting uninstall: pandas
Found existing installation: pandas 1.1.5
Uninstalling pandas-1.1.5:
  Successfully uninstalled pandas-1.1.5
Running setup.py install for pandas: started

    One reason might be pandas==0.18.0 does not support python>3.5 as in https://pandas.pydata.org/pandas-docs/version/0.18.0/install.html?

  2. When I install pandas==1.1.5 and run python main_prioritization.py, some error occurs seems coming from pandas as:

    
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/tensorflow/python/framework/dtypes.py:519: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint8 = np.dtype([("qint8", np.int8, 1)])
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/tensorflow/python/framework/dtypes.py:520: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_quint8 = np.dtype([("quint8", np.uint8, 1)])
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/tensorflow/python/framework/dtypes.py:521: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint16 = np.dtype([("qint16", np.int16, 1)])
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/tensorflow/python/framework/dtypes.py:522: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_quint16 = np.dtype([("quint16", np.uint16, 1)])
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/tensorflow/python/framework/dtypes.py:523: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint32 = np.dtype([("qint32", np.int32, 1)])
/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/tensorflow/python/framework/dtypes.py:528: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
np_resource = np.dtype([("resource", np.ubyte, 1)])

Bad key savefig.frameon in file /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle, line 421 ('savefig.frameon : True') You probably need to get an updated matplotlibrc file from https://github.com/matplotlib/matplotlib/blob/v3.3.3/matplotlibrc.template or from the matplotlib source distribution

Bad key verbose.level in file /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle, line 472 ('verbose.level : silent # one of silent, helpful, debug, debug-annoying') You probably need to get an updated matplotlibrc file from https://github.com/matplotlib/matplotlib/blob/v3.3.3/matplotlibrc.template or from the matplotlib source distribution

Bad key verbose.fileo in file /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle, line 473 ('verbose.fileo : sys.stdout # a log filename, sys.stdout or sys.stderr') You probably need to get an updated matplotlibrc file from https://github.com/matplotlib/matplotlib/blob/v3.3.3/matplotlibrc.template or from the matplotlib source distribution In /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle: The text.latex.preview rcparam was deprecated in Matplotlib 3.3 and will be removed two minor releases later. In /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle: The mathtext.fallback_to_cm rcparam was deprecated in Matplotlib 3.3 and will be removed two minor releases later. In /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle: Support for setting the 'mathtext.fallback_to_cm' rcParam is deprecated since 3.3 and will be removed two minor releases later; use 'mathtext.fallback : 'cm' instead. In /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle: The validate_bool_maybe_none function was deprecated in Matplotlib 3.3 and will be removed two minor releases later. In /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle: The savefig.jpeg_quality rcparam was deprecated in Matplotlib 3.3 and will be removed two minor releases later. In /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle: The keymap.all_axes rcparam was deprecated in Matplotlib 3.3 and will be removed two minor releases later. In /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle: The animation.avconv_path rcparam was deprecated in Matplotlib 3.3 and will be removed two minor releases later. In /home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle: The animation.avconv_args rcparam was deprecated in Matplotlib 3.3 and will be removed two minor releases later. Traceback (most recent call last): File "main_prioritization.py", line 17, in from skchem.metrics import bedroc_score File "/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/skchem/init.py", line 19, in from . import pandas_ext File "/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/skchem/pandas_ext/init.py", line 10, in from .structure_methods import StructureMethods File "/home/tlc/anaconda3/envs/pgcn/lib/python3.6/site-packages/skchem/pandas_ext/structure_methods.py", line 16, in from pandas.core.base import NoNewAttributesMixin, AccessorProperty ImportError: cannot import name 'AccessorProperty'



I will be really appreaciate if you can provide me some solution. Hope you well in this difficult time.
sunnchioo commented 3 years ago

May be you can install it by conda install pandas==0.18.0 .