lizzieinvancouver / grephon

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info on determinate vs indeterminate by species #13

Closed lizzieinvancouver closed 7 months ago

lizzieinvancouver commented 1 year ago

See this UBC link ... where does this info come from? Who teaches this course? Do they know?

lizzieinvancouver commented 1 year ago

@FrederikBaumgarten reported on this Monday and "said the information is harder to find than he thought, but is working on it." @jannekehrl continued "We had a general discussion about how this seems super important (to understanding endogenous factors), might not be as categorical as the two words make it seem, and much less known / studied than we would have expected so bound to come up in the discussion."

I agree! And I think some of the best info is somewhere in the Forestry group at UBC.

rdmanzanedo commented 1 year ago

Anecdotically, image from our green house with the oaks doing 2 very clear growth strechtes (and creating buds in the middle) these are the control ones! Imagen de WhatsApp 2023-07-19 a las 12 08 44 Determinate buds in the first and then able to re-start growth, switch to indeterminate?

lizzieinvancouver commented 1 year ago

@rdmanzanedo Cool photo!

@FrederikBaumgarten Can you post your current notes here? And @jannekehrl friendly reminder to ask your molecular colleague about this.

lizzieinvancouver commented 1 year ago

Notes I have from Monday are they generally juvenile trees and early-successional are more indet than det. @FrederikBaumgarten See if you can ask Rob Guy and/or Sally Aitken for more info. Also if you can label the species/genera we have in issue #9 -- @AileneKane can add it to plots.

FrederikBaumgarten commented 1 year ago

Here some infos I could gather so far:

lizzieinvancouver commented 1 year ago

Thanks @FrederikBaumgarten !

I asked a molecular colleague for some info and she thought there could be links about determinate buds FLC which controls a million things (leaf shape, leaf thickness, cold tolerance, drought tolerance), including vernalization and so controls the switch between what some call `perpetual growth' versus doing it all in one season.

The Coupland lab might have some relevant publications on this 'lifestyle' change.

Also, this is all epigenetically regulated, so plants shift over time.

I don't know if there is FLC in trees though ... the only possibly relevant paper I found was this one on citrus. I think we'd have to dig into the 'competancy' literature to find more, as I am not sure if 'determinate' and 'indetereminate' are used so much anymore (perhaps?).

FrederikBaumgarten commented 1 year ago

thanks lizzie for posting even some new terms here! I have talked to Sally and Rob and I am waiting for some more papers that Julie and Tolu are trying to find. I keep you posted!

lizzieinvancouver commented 7 months ago

Extremely done. Thanks @FrederikBaumgarten !