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lizzieinvancouver / temporalvar

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megaD runs - flag in PhenBatchScript #26

Closed donahuem closed 5 years ago

donahuem commented 5 years ago

Set up two versions of PhenBatchScript, one for regular runs and one for megaD runs. Flag PHEN_RUNNUM will be assigned a value <100 for regular runs and 101, 102,... for megaD runs. Add flag to getRunParms so that PHEN_RUNNUM values >100 will call getInputParms_megaD.txt and otherwise getInputParms.txt

donahuem commented 5 years ago

For megaD runs, add flag that if megaD=1, that this is read as a flag with the standard level of rho=-0.5.

donahuem commented 5 years ago

megaD flag for standard rho=-0.5 is completed.

donahuem commented 5 years ago

For megaD, defined new vars for output (R0id, R0mean, R0median, R0autocor). Need to make conditional write statements for megaD and non-megaD outputs

donahuem commented 5 years ago

These changes have all been made and tested locally. Now sending a test batch of megaD runs. Closing this issue.