llrs / thesis

PhD thesis on data integration on inflammatory bowel disease
https://thesis.llrs.dev/
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Explain sequencing #7

Closed llrs closed 2 years ago

llrs commented 2 years ago

At least a brief introduction about primers, amplification, library generation... It is kind of basic but it is important later for the discussion on microbiota and comparing multiple microbiome datasets (V1 vs V3-V4..., ASV vs OTUs)...

Also it might be interesting to have on writing how the human mRNA is sequenced (selection, primers...)

llrs commented 2 years ago

Already sent without this section... I might need to add it later or maybe it is not so important to include on the introduction. At least a sentence and some references with pointers about how to do that...

llrs commented 2 years ago

It is mentioned on the appendix (at least how the STAR and RSEM part was done)