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Bug tryig to install the heta simulator. I got the following backtrace: #88219

Open smithlsh opened 6 months ago

smithlsh commented 6 months ago

Progress [=============> ] 6/19 ◓ NonlinearSolve PLEASE submit a bug report to https://github.com/llvm/llvm-project/issues/ and include the crash backtrace. Stack dump: Progress [=============> ] 6/19 ◒ NonlinearSolve

0 0x00007f127003a30f PrintStackTraceSignalHandler(void*) (/EFS/julia/julia-1.9.1/lib/julia/libLLVM-14jl.so+0x9a430f)

1 0x00007f1270037c99 SignalHandler(int) (/EFS/julia/julia-1.9.1/lib/julia/libLLVM-14jl.so+0x9a1c99)

2 0x00007f1274438980 __restore_rt (/lib/x86_64-linux-gnu/libpthread.so.0+0x12980)

3 0x00007f126ed4c56b /build/glibc-S9d2JN/glibc-2.27/string/../sysdeps/x86_64/multiarch/memmove-vec-unaligned-erms.S:501:0

4 0x00000000005bf5a8 void lld::elf::InputSection::writeTo<llvm::object::ELFType<(llvm::support::endianness)1, true> >(unsigned char*) (/EFS/julia/julia-1.9.1/libexec/julia/lld+0x5bf5a8)

5 0x00000000005ee9ac void llvm::function_ref<void (unsigned long)>::callback_fn<lld::elf::OutputSection::writeTo<llvm::object::ELFType<(llvm::support::endianness)1, true> >(unsigned char*)::{lambda(unsigned long)#2}>(long, unsigned long) (/EFS/julia/julia-1.9.1/libexec/julia/lld+0x5ee9ac)

6 0x00007f126ff8ace8 llvm::parallelForEachN(unsigned long, unsigned long, llvm::function_ref<void (unsigned long)>) (/EFS/julia/julia-1.9.1/lib/julia/libLLVM-14jl.so+0x8f4ce8)

7 0x00000000005f50b1 void lld::elf::OutputSection::writeTo<llvm::object::ELFType<(llvm::support::endianness)1, true> >(unsigned char*) (/EFS/julia/julia-1.9.1/libexec/julia/lld+0x5f50b1)

8 0x000000000069b263 (anonymous namespace)::Writer<llvm::object::ELFType<(llvm::support::endianness)1, true> >::run() (/EFS/julia/julia-1.9.1/libexec/julia/lld+0x69b263)

9 0x000000000069bd29 void lld::elf::writeResult<llvm::object::ELFType<(llvm::support::endianness)1, true> >() (/EFS/julia/julia-1.9.1/libexec/julia/lld+0x69bd29)

10 0x00000000005618cc lld::elf::LinkerDriver::link(llvm::opt::InputArgList&) [clone .localalias.0] (/EFS/julia/julia-1.9.1/libexec/julia/lld+0x5618cc)

11 0x0000000000563f2d lld::elf::LinkerDriver::linkerMain(llvm::ArrayRef<char const*>) [clone .localalias.3] (/EFS/julia/julia-1.9.1/libexec/julia/lld+0x563f2d)

12 0x0000000000564ebc lld::elf::link(llvm::ArrayRef<char const*>, llvm::raw_ostream&, llvm::raw_ostream&, bool, bool) (/EFS/julia/julia-1.9.1/libexec/julia/lld+0x564ebc)

13 0x00000000004826a1 lldMain(int, char const**, llvm::raw_ostream&, llvm::raw_ostream&, bool) (/EFS/julia/julia-1.9.1/libexec/julia/lld+0x4826a1)

14 0x0000000000480335 main (/EFS/julia/julia-1.9.1/libexec/julia/lld+0x480335)

◑ NonlinearSolve ┌ Error: Pkg.precompile error │ exception = │ failed process: Process(setenv(/EFS/julia/julia-1.9.1/libexec/julia/lld -flavor gnu '' -shared -o /data/home/shsm/.julia/compiled/v1.9/NonlinearSolve/jl_W5ln4W --whole-archive /data/home/shsm/.julia/compiled/v1.9/NonlinearSolve/jl_DfctFI --no-whole-archive -L/EFS/julia/julia-1.9.1/lib -L/EFS/julia/julia-1.9.1/lib/julia -L/EFS/julia/julia-1.9.1/lib -ljulia -ljulia-internal,["LD_LIBRARY_PATH=/EFS/julia/julia-1.9.1/lib/julia:/EFS/julia/julia-1.9.1/lib", "DBUS_SESSION_BUS_ADDRESS=unix:path=/run/user/88947444/bus", "COOKBOOK_VERSION=122f6207920a3d7892431b2ea61d270220d2e40a", "MODULEPATH=/etc/environment-modules/modules:/usr/share/modules/versions:/usr/share/modules/\$MODULE_VERSION/modulefiles:/usr/share/modules/modulefiles:/opt/intel/impi/2019.7.217/intel64/modulefiles", "JULIA_IMAGE_THREADS=1", "USER=shsm", "JULIA_EDITOR=code", "LESSCLOSE=/usr/bin/lesspipe %s %s", "METWORX_VERSION=21.08", "BASH_FUNC_module%%=() { unset _mlre _mlIFS _mlshdbg;\n if [ \"\${MODULES_SILENT_SHELL_DEBUG:-0}\" = '1' ]; then\n case \"\$-\" in \n vx)\n set +vx;\n _mlshdbg='vx'\n ;;\n v)\n set +v;\n _mlshdbg='v'\n ;;\n x)\n set +x;\n _mlshdbg='x'\n ;;\n )\n _mlshdbg=''\n ;;\n esac;\n fi;\n if [ -n \"\${IFS+x}\" ]; then\n _mlIFS=\$IFS;\n fi;\n IFS=' ';\n for _mlv in \${MODULES_RUN_QUARANTINE:-};\n do\n if [ \"\${_mlv}\" = \"\${mlv##*[!A-Za-z0-9]}\" -a \"\${_mlv}\" = \"\${_mlv#[0-9]}\" ]; then\n if [ -n \"eval 'echo \${'\$_mlv'+x}'\" ]; then\n _mlre=\"\${_mlre:-}\${_mlv}_modquar='eval 'echo \${'\$_mlv'}'' \";\n fi;\n _mlrv=\"MODULESRUNENV\${_mlv}\";\n _mlre=\"\${_mlre:-}\${_mlv}='eval 'echo \${'\$_mlrv':-}'' \";\n fi;\n done;\n if [ -n \"\${_mlre:-}\" ]; then\n _mlre=\"eval \${_mlre}\";\n fi;\n eval \${_mlre:-}/usr/bin/tclsh /usr/lib/x86_64-linux-gnu/modulecmd.tcl bash \$*;\n _mlstatus=\$?;\n if [ -n \"\${_mlIFS+x}\" ]; then\n IFS=\$_mlIFS;\n else\n unset IFS;\n fi;\n if [ -n \"\${_mlshdbg:-}\" ]; then\n set -\$_mlshdbg;\n fi;\n unset _mlre _mlv _mlrv _mlIFS _mlshdbg;\n return \$_mlstatus\n}" … "SSH_CONNECTION=10.10.225.59 52693 10.145.5.188 22", "SGE_QMASTER_PORT=6444", "R_EXE_4_0=/opt/R/4.0.5/bin/R", "MAIL=/var/mail/shsm", "FONTCONFIG_PATH=/data/home/shsm/.julia/artifacts/387d89822da323c098aba6f8ab316874d4e90f2e/etc/fonts", "XDG_SESSION_ID=22", "CONDA_ENVS_DIRS=/apps/conda/shsm/envs", "R_EXE_3_6=/opt/R/3.6.3/bin/R", "R_EXE_DEFAULT=/opt/R/4.1.1/bin/R", "LS_COLORS="]), ProcessSignaled(7)) [0] │
│ Stacktrace: │ [1] pipeline_error │ @ ./process.jl:565 [inlined] │ [2] run(::Cmd, ::Base.DevNull, ::Vararg{Any}; wait::Bool) │ @ Base ./process.jl:480 │ [3] run │ @ ./process.jl:477 [inlined] │ [4] link_image (repeats 2 times) │ @ ./linking.jl:166 [inlined] │ [5] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) │ @ Base ./loading.jl:2202 │ [6] #249 │ @ /EFS/julia/julia-1.9.1/share/julia/stdlib/v1.9/Pkg/src/API.jl:1438 [inlined] │ [7] withenv(f::Pkg.API.var"#249#280"{IOBuffer, String, Base.PkgId}, keyvals::Pair{String, String}) │ @ Base ./env.jl:197 │ [8] (::Pkg.API.var"#248#279"{IOBuffer, String, Base.PkgId})() │ @ Pkg.API /EFS/julia/julia-1.9.1/share/julia/stdlib/v1.9/Pkg/src/API.jl:1436 │ [9] with_logstate(f::Function, logstate::Any) │ @ Base.CoreLogging ./logging.jl:514 │ [10] with_logger │ @ ./logging.jl:626 [inlined] │ [11] macro expansion │ @ ./timing.jl:393 [inlined] │ [12] macro expansion │ @ /EFS/julia/julia-1.9.1/share/julia/stdlib/v1.9/Pkg/src/API.jl:1434 [inlined] │ [13] (::Pkg.API.var"#245#276"{Bool, Bool, Pkg.Types.Context, Vector{Task}, Dict{Base.PkgId, String}, Dict{Base.PkgId, IOBuffer}, Pkg.API.var"#color_string#266", Base.Event, Base.Event, ReentrantLock, Vector{Base.PkgId}, Vector{Base.PkgId}, Dict{Base.PkgId, String}, Vector{Base.PkgId}, Vector{Base.PkgId}, Dict{Base.PkgId, Bool}, Dict{Base.PkgId, Base.Event}, Dict{Base.PkgId, Bool}, Vector{Pkg.Types.PackageSpec}, Dict{Base.PkgId, String}, Dict{Tuple{Base.PkgId, UInt128, String, String}, Bool}, Vector{Base.PkgId}, Bool, Base.TTY, Base.Semaphore, String, Vector{String}, Vector{Base.PkgId}, Base.PkgId})() │ @ Pkg.API ./task.jl:514 └ @ Pkg.API /EFS/julia/julia-1.9.1/share/julia/stdlib/v1.9/Pkg/src/API.jl:1302

llvmbot commented 6 months ago

@llvm/issue-subscribers-lld-elf

Author: None (smithlsh)