How to get the second input file 'Rooted bootstrap species trees with branch lengths measured in coalescent units (can be obtained by running MPEST/ASTRAL on bootstrap gene trees, newick format)' ?

lmcai / Coalescent_simulation_and_gene_flow_detection

R and Python scripts used to simulate gene trees under coalescent model and detect gene flow using triple frequency

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How to get the second input file 'Rooted bootstrap species trees with branch lengths measured in coalescent units (can be obtained by running MPEST/ASTRAL on bootstrap gene trees, newick format)' ? #3

Open Galaxy-228 opened 2 years ago

Galaxy-228 commented 2 years ago

Hi: Now i have the first and third input file using IQTREE and ASTRAL, but how to get the second file 'Rooted bootstrap species trees with branch lengths measured in coalescent units'? Thanks so much !

Galaxy-228 commented 2 years ago

I have solved the question~ Thanks a lot

zhangmenghua123 commented 1 year ago

Hi, how did you get the second file？

szf1993325 commented 10 months ago

What do you solved the question?

tsm-tsm commented 4 months ago

What do you solved the question?