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lmrodriguezr / nonpareil

Estimate metagenomic coverage and sequence diversity
http://enve-omics.ce.gatech.edu/nonpareil/
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Cannot install Nonpareil.R #10

Closed lmrodriguezr closed 8 years ago

lmrodriguezr commented 9 years ago

See the following session reported in a GNU Linux box:

$ sudo make install
if [ ! -d /usr/local/bin ] ; then mkdir -p /usr/local/bin ; fi
if [ ! -d /usr/local/man/man1 ] ; then mkdir -p /usr/local/man/man1 ; fi
if [ -e nonpareil ] ; then install -m 0755 nonpareil /usr/local/bin/ ; fi
if [ -e nonpareil-mpi ] ; then install -m 0755 nonpareil-mpi /usr/local/bin/ ; fi
cp docs/_build/man/nonpareil.1 /usr/local/man/man1/nonpareil.1
R CMD INSTALL utils/Nonpareil
* installing to library ‘/usr/local/lib/R/site-library’
* installing *source* package ‘Nonpareil’ ...
** R
** preparing package for lazy loading
Error in eval(expr, envir, enclos) : object '..' not found
Error : unable to load R code in package 'Nonpareil'
ERROR: lazy loading failed for package 'Nonpareil'
* removing '/usr/local/lib/R/site-library/Nonpareil'
make: *** [install] Error 1
lmrodriguezr commented 9 years ago

This error occurred in a machine running Ubuntu server 10.2 and R 3.1.2

lmrodriguezr commented 8 years ago

I couldn't reproduce this error, I'll close it until I confirm any other incident.