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lmrodriguezr / nonpareil

Estimate metagenomic coverage and sequence diversity
http://enve-omics.ce.gatech.edu/nonpareil/
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Conda Installation Breaks R (everytime) #31

Closed Roli-Wilhelm closed 4 years ago

Roli-Wilhelm commented 6 years ago

Hi There,

Installing nonpareil into a fresh conda environment with R-base produces the following error: "/home/roli/anaconda3/envs/nonpareil/lib/R/bin/exec/R: error while loading shared libraries: libiconv.so.2: cannot open shared object file: No such file or directory"

Please advise. (this error was replicated in my base conda environment: i.e. user beware)

lmrodriguezr commented 6 years ago

Hello @Roli-Wilhelm @bebatut have you seen this? I'm not very familiar with the conda env. Do we need to change the way we install the R package? I could produce a matching release for both sides (right now the R package is a little ahead in CRAN).

lmrodriguezr commented 4 years ago

I'm following up on this old issue. I wasn't able to replicate the problem in a fresh conda environment (I tested both Linux and macOS). Perhaps it was a (now resolved) issue with R?

I'll close this issue as it doesn't appear to be there any longer, but please feel free to reopen if you experience this again.