Unable to find required package ‘Nonpareil’ in the R package

lmrodriguezr / nonpareil

Estimate metagenomic coverage and sequence diversity

http://enve-omics.ce.gatech.edu/nonpareil/

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Unable to find required package ‘Nonpareil’ in the R package #36

Closed shimingt closed 5 years ago

shimingt commented 5 years ago

Dear Luis,

I have installed nonpareil using conda, and have successfully performed obtain the .npo files. Unfortunately, I am not able to load the nonpareil package library in R.

> library(Nonpareil)
Error in library(Nonpareil) : there is no package called ‘Nonpareil’

I have also tried to install nonpareil using the "make" command, but to no avail.

Will appreciate any help that can be rendered.

Thank you!

lmrodriguezr commented 5 years ago

Hello @shimingt

The Nonpareil package is available in the official CRAN repository, so you can simply run this in R:

install.packages('Nonpareil')

I'll close the issue for now, but please feel free to respond if you want us to reopen.

Best, Miguel.