lmrodriguezr
commented
1 year ago Hi @bramvandijk88
Sorry for the long delay, I missed when this issue was opened. This is not an issue with the code, but with the documentation: The arrows are not properly documented, but they actually represent the location corresponding to exp(Nd), which is a metric of sequence diversity based on the projection of the Nonpareil curve. Curves with corresponding arrows that are more to the right indicate a higher sequence diversity. The location of the estimate for the full dataset can be determined in your curves by the right-most point of the solid lines. Alternatively, if you choose not to display the rarefied curve (model only) Nonpareil will indicate the corresponding point with a little disc (and empty circle).
I'll leave this issue open until we expand the documentation. Thanks for your report! Miguel.
Heya,
I am assuming this is a simple bug, but just to be sure I will ask here. The arrows for indicating the sequencing effort seem to be placed wrongly for my data. (see figure below)