Error in `[[<-.data.frame`(`*tmp*`, i, value = c(0, 1, 0, 1)) :

[liu-felix123]

Hi Louise,

i followed your step ,as below: step1 library(ITSMe) step2 pc_tree <- read_tree_pc(path = "path/to/point/cloud.txt") step3 out_dbh <- dbh_pc(pc = pc_tree, plot = TRUE)

step3 has a little problem, its show as below: "Error in [[<-.data.frame(*tmp*, i, value = c(0, 1, 0, 1)) :"

i used the cloud.txt which belong to your tests_point_cloud folder,named pc_tree.

when i add a new row to the cloud.txt,the step3 is pass. is it right do this? or other way to solve it

look foward to reply,thanks.

[lmterryn]

Hi Liu

Can you send me a screenshot of what you did and how the "pc_tree" variable looks in R? Which tree point cloud did you use specifically? Did you use one in the /tests/non_buttressed_trees folder?

Cheers Louise

Van: liu-felix123 @.> Verzonden: vrijdag 2 december 2022 10:01 Aan: lmterryn/ITSMe @.> CC: Subscribed @.**> Onderwerp: [lmterryn/ITSMe] Error in [[<-.data.frame(`tmp*`, i, value = c(0, 1, 0, 1)) : (Issue #1)

Hi Louise,

i followed your step ,as below: step1 library(ITSMe) step2 pc_tree <- read_tree_pc(path = "path/to/point/cloud.txt") step3 out_dbh <- dbh_pc(pc = pc_tree, plot = TRUE)

step3 has a little problem, its show as below: "Error in [[<-.data.frame(tmp, i, value = c(0, 1, 0, 1)) :"

i used the cloud.txt which belong to your tests_point_cloud folder,named pc_tree.

when i add a new row to the cloud.txt,the step3 is pass. is it right do this? or other way to solve it

look foward rto eply,thanks.

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[liu-felix123]

sorry, the error“Error in [[<-.data.frame(tmp, i, value = c(0, 1, 0, 1)) :" cannot recurrence.maybe something is fixed. but its show a new problem,the screenshoot,as below：

[lmterryn]

Hi

I see you accidentally typed “pc_treepc_tree” instead of “pc_tree”. That explains why it doesn’t find “pc_tree”.

Cheers Louise

Van: liu-felix123 @.> Verzonden: vrijdag 2 december 2022 12:34 Aan: lmterryn/ITSMe @.> CC: Louise Terryn @.>; Comment @.> Onderwerp: Re: [lmterryn/ITSMe] Error in [[<-.data.frame(*tmp*, i, value = c(0, 1, 0, 1)) : (Issue #1)

sorry, the error“Error in [[<-.data.frame(tmp, i, value = c(0, 1, 0, 1)) :" cannot recurrence.maybe something is fixed. but its show a new problem,the screenshoot,as below： [1ON73NU3QWHFVMOM{PLT03]https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fuser-images.githubusercontent.com%2F100141618%2F205283247-f7eabf3c-a190-4c3f-9295-14a6a38f9d74.png&data=05%7C01%7Clouise.terryn%40ugent.be%7C1c4f703e092e47ed4e7a08dad4591e79%7Cd7811cdeecef496c8f91a1786241b99c%7C1%7C0%7C638055776481153050%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=dDSjifE7MKke6TIR5M5runwUr3qNBpR6NxOA4oxiY6c%3D&reserved=0

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[liu-felix123]

a oh, thank you I entered it correctly,The error reappears

variable looks in R as belows:

[lmterryn]

Hi

You are showing me the “pc_treepc_tree” variable which is not equal to to the “pc_tree” variable. If you read in the pc_tree.txt point cloud your variable should look like this: @.***

Cheers Louise

Van: liu-felix123 @.> Verzonden: zondag 4 december 2022 7:31 Aan: lmterryn/ITSMe @.> CC: Louise Terryn @.>; Comment @.> Onderwerp: Re: [lmterryn/ITSMe] Error in [[<-.data.frame(*tmp*, i, value = c(0, 1, 0, 1)) : (Issue #1)

a oh, thank you I entered it correctly,The error reappears

variable looks in R as belows:

刘芳宏 @.<mailto:@.>

 

------------------ 原始邮件 ------------------ 发件人: "lmterryn/ITSMe" @.&gt<mailto:@.&gt>;; 发送时间: 2022年12月2日(星期五) 晚上8:07 @.&gt<mailto:@.&gt>;; @.**@.&gtmailto:***@***.******@***.***&gt;; 主题: Re: [lmterryn/ITSMe] Error in [[<-.data.frame(*tmp*, i, value = c(0, 1, 0, 1)) : (Issue #1)

Hi

I see you accidentally typed “pc_treepc_tree” instead of “pc_tree”. That explains why it doesn’t find “pc_tree”.

Cheers Louise

Van: liu-felix123 @.&gt<mailto:@.&gt>; Verzonden: vrijdag 2 december 2022 12:34 Aan: lmterryn/ITSMe @.&gt<mailto:@.&gt>; CC: Louise Terryn @.&gt<mailto:@.&gt>;; Comment @.&gt<mailto:@.&gt>; Onderwerp: Re: [lmterryn/ITSMe] Error in [[<-.data.frame(*tmp*, i, value = c(0, 1, 0, 1)) : (Issue #1)

sorry, the error“Error in [[<-.data.frame(tmp, i, value = c(0, 1, 0, 1)) :" cannot recurrence.maybe something is fixed. but its show a new problem,the screenshoot,as below： [1ON73NU3QWHFVMOM{PLT03]<https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fuser-images.githubusercontent.com%2F100141618%2F205283247-f7eabf3c-a190-4c3f-9295-14a6a38f9d74.png&amp;data=05%7C01%7Clouise.terryn%40ugent.be%7C1c4f703e092e47ed4e7a08dad4591e79%7Cd7811cdeecef496c8f91a1786241b99c%7C1%7C0%7C638055776481153050%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&amp;sdata=dDSjifE7MKke6TIR5M5runwUr3qNBpR6NxOA4oxiY6c%3D&amp;reserved=0&gt;

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[liu-felix123]

like what? the screenshot seems to loss.could you send the screenshot again? ok ,iknow you mean, i indeed select wrong PC_Tree .txt

[lmterryn]

[liu-felix123]

the error still exist

[liu-felix123]

depend on error ,My understand is data.frame need 4 rows of data ,but the read .txt has three.so its conflict

[lmterryn]

I found that the problem was with updated packages ITSMe depends on. I think I fixed the problem. Try removing and installing the package again and let me know if you still get that error.

Cheers Louise

[liu-felix123]

thank you, its passed. but the fit plot not show.

刘芳宏 @.***

 

------------------ 原始邮件 ------------------ 发件人: "lmterryn/ITSMe" @.>; 发送时间: 2022年12月6日(星期二) 凌晨4:01 @.>; @.**@.>; 主题: Re: [lmterryn/ITSMe] Error in [[<-.data.frame(*tmp*, i, value = c(0, 1, 0, 1)) : (Issue #1)

I found that the problem was with updated packages ITSMe depends on. I think I fixed the problem. Try removing and installing the package again and let me know if you still get that error.

Cheers Louise

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[lmterryn]

Yes it does not automatically print the figure now. But you can see the figure by accessing the plot from the output: out_dbh <- dbh_pc(pc = pc_tree, plot = TRUE) out_dbh$plot

[liu-felix123]

its worked. thanks for your carefully instructor

Best Regards Felix Liu

刘芳宏 @.***

 

------------------ 原始邮件 ------------------ 发件人: "lmterryn/ITSMe" @.>; 发送时间: 2022年12月6日(星期二) 晚上7:24 @.>; @.**@.>; 主题: Re: [lmterryn/ITSMe] Error in [[<-.data.frame(*tmp*, i, value = c(0, 1, 0, 1)) : (Issue #1)

Yes it does not automatically print the figure now. But you can see the figure by accessing the plot from the output: out_dbh <- dbh_pc(pc = pc_tree, plot = TRUE) out_dbh$plot

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