#N/A in expression markers values

lmweber / diffcyt

R package for differential discovery analyses in high-dimensional cytometry data

MIT License

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Open algebio opened 3 years ago

algebio commented 3 years ago

Hello

I get some #N/A values when I run

p <- topTable(ds_res2, show_props = TRUE, format_vals = TRUE, digits = 2) write.xlsx(p@listData, "ds_res2.xlsx") (File attached)

Is this a problem of my dataset or is it something I am doing wrong? Any idea of how to solve this?

I have another issue opened which I think it could be related to this one.

Thank you for your help.

Regards Juan

algebio commented 3 years ago

Hello again

Attached a second file where I saw that the #N/A in meds columns are due to values = 0 in props column. dsres2.xlsx

I would appreciate any guidance to solve this problem.

Thank you for your help.

Regards Juan