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lmweber
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nnSVG
nnSVG: scalable method to identify spatially variable genes (SVGs) in spatially-resolved transcriptomics data
MIT License
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Improvement on large dataset
#22
rocketeer1998
opened
5 months ago
0
Computational Complexity of NNGP
#21
zhengxiaoUVic
closed
9 months ago
2
fix for error with matrix input (also issue #19)
#20
LylaAtta123
closed
8 months ago
3
error when using matrix as input
#19
haotian-zhuang
closed
8 months ago
1
Problem with more than two spatial coordinates
#18
const-ae
closed
1 year ago
4
Vignette section on downstream clustering
#17
lmweber
closed
8 months ago
0
Error: BiocParallel errors
#16
juexinwang
closed
1 year ago
10
Wrong LR Test for Interceptless Covariate Model
#15
boyiguo1
closed
1 year ago
4
Issues with very small number of spots
#14
lmweber
closed
1 year ago
3
length scale
#13
ruqianl
opened
2 years ago
3
Filtering function can introduce zeros
#12
lmweber
closed
1 year ago
2
Example with multiple samples in vignette
#11
lmweber
closed
1 year ago
2
Issue to generate readme image URLs
#10
lmweber
closed
2 years ago
1
logcounts in examples and vignette
#9
lmweber
closed
2 years ago
0
Covariates example in vignette
#8
lmweber
closed
2 years ago
1
Error: BiocParallel errors
#7
ansonkn
closed
1 year ago
4
Check output format for non-SPE inputs
#6
lmweber
closed
2 years ago
0
Workflow example on readme
#5
lmweber
closed
2 years ago
2
Enable non-SpatialExperiment inputs
#4
lmweber
closed
2 years ago
1
Error on vignette
#3
davidecrs
closed
2 years ago
2
Memory usage / HDF5 / parallelization
#2
lmweber
closed
2 years ago
0
Handle warning messages from BRISC
#1
lmweber
closed
2 years ago
0