issues
search
logsdon-lab
/
CenMAP
Centromere mapping and annotation pipeline
MIT License
9
stars
0
forks
source link
feat: Quality-of-life Improvements and Cleaner Organization
#28
Closed
koisland
closed
7 months ago
koisland
commented
7 months ago
Simplified outputs so intermediates are not included in the final DAG.
Add CHM13 reference genome via Git LFS.
Add
mem_mb
config param for resource-intensive steps.
Moved pattern/color configuration for RepeatMasker satellite annotation plot to separate file.
Refactored RepeatMasker status check and centromere corrections to separate Snakefile.
mem_mbconfig param for resource-intensive steps.