Closed koisland closed 1 month ago
config_censtats_status
censtats status
RepeatMasker
nucflag
nucflag_ignore.bed
config_censtats_status
optional config file to specify thresholds forcenstats status
.RepeatMasker
annotations to nucflag plots.nucflag
workflow to be afterRepeatMasker
.nucflag
to only consider misassemblies in ALR/Alpha repeats.nucflag_ignore.bed
as it caused small or partial centromeres to be missed.censtats status
and chrX.