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logsdon-lab
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CenMAP
Centromere mapping and annotation pipeline
MIT License
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feat: Snakemake v8
#64
Closed
koisland
closed
1 month ago
koisland
commented
1 month ago
Bumped Snakemake to
v8.14.0
.
Removed
pandas
as workflow dependency.
Removed bedminmax scripts and replaced with
bedtools groupby
.
Resolves #52
Changed
mem
configuration options to work with
snakemake-executor-plugin-lsf
.
Changed to
minimal
branch of asm-to-reference-alignment pipeline.
Renamed plot names to be more consistent with one another.
v8.14.0.pandasas workflow dependency.bedtools groupby.memconfiguration options to work with snakemake-executor-plugin-lsf .minimalbranch of asm-to-reference-alignment pipeline.